Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 MIR4497-201ENST00000583208 89 ntBASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX9Q9Y5X1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 TSPY7P-201ENST00000431358 1114 ntBASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 AL353708.3-201ENST00000610272 989 ntBASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX9Q9Y5X1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 NIFKP9-201ENST00000419265 221 ntBASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 FAM197Y1-201ENST00000421178 764 ntBASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 AC073195.1-201ENST00000607241 877 ntBASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SNX9Q9Y5X1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 CD177P1-201ENST00000606252 935 ntBASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 KRT8P8-201ENST00000434750 1448 ntBASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX9Q9Y5X1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX9Q9Y5X1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX9Q9Y5X1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX9Q9Y5X1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX9Q9Y5X1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms