Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NINLQ9Y2I6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 TSPY14P-201ENST00000303979 915 ntBASIC26.76■■□□□ 1.87
NINLQ9Y2I6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 AL160286.2-201ENST00000567150 934 ntBASIC26.76■■□□□ 1.87
NINLQ9Y2I6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 TCF3P1-201ENST00000423021 1937 ntBASIC26.76■■□□□ 1.87
NINLQ9Y2I6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 LINC01568-207ENST00000641790 1380 ntBASIC26.76■■□□□ 1.87
NINLQ9Y2I6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NINLQ9Y2I6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 FAM207BP-201ENST00000447172 505 ntBASIC26.75■■□□□ 1.87
NINLQ9Y2I6 AC008040.2-201ENST00000461049 708 ntBASIC26.75■■□□□ 1.87
NINLQ9Y2I6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 AC097488.1-201ENST00000507834 756 ntBASIC26.75■■□□□ 1.87
NINLQ9Y2I6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NINLQ9Y2I6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 AC091390.4-202ENST00000476426 537 ntBASIC26.74■■□□□ 1.87
NINLQ9Y2I6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 KRT18P22-201ENST00000402024 1347 ntBASIC26.74■■□□□ 1.87
NINLQ9Y2I6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NINLQ9Y2I6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 LINC01521-201ENST00000504184 1943 ntBASIC26.73■■□□□ 1.87
NINLQ9Y2I6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 DUT-205ENST00000558813 769 ntTSL 2 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
NINLQ9Y2I6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 EGLN1P1-201ENST00000531623 762 ntBASIC26.72■■□□□ 1.87
NINLQ9Y2I6 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NINLQ9Y2I6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.71■■□□□ 1.87
NINLQ9Y2I6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms