Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.15■□□□□ 0.82
PRDM4Q9UKN5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRDM4Q9UKN5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.14■□□□□ 0.82
PRDM4Q9UKN5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PRDM4Q9UKN5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRDM4Q9UKN5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 AC121338.2-201ENST00000622535 1744 ntBASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 AL138724.1-201ENST00000606771 1088 ntBASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRDM4Q9UKN5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 FP700111.2-201ENST00000619190 1892 ntBASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.12■□□□□ 0.81
PRDM4Q9UKN5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 AC005052.1-201ENST00000625181 2492 ntBASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 AC020763.4-201ENST00000623414 4170 ntBASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRDM4Q9UKN5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.1■□□□□ 0.81
PRDM4Q9UKN5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PRDM4Q9UKN5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PRDM4Q9UKN5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms