Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42SE2Q9NRR3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42SE2Q9NRR3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42SE2Q9NRR3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.46□□□□□ -0.26
CDC42SE2Q9NRR3 AL138781.2-201ENST00000617896 1843 ntBASIC13.46□□□□□ -0.26
CDC42SE2Q9NRR3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42SE2Q9NRR3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 AC018553.1-201ENST00000616682 1458 ntBASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 CYP2T1P-201ENST00000432607 1285 ntBASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 AC011767.1-201ENST00000617410 1153 ntBASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 OR10C1-204ENST00000622521 1039 ntBASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42SE2Q9NRR3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AC020763.4-201ENST00000623414 4170 ntBASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AC010980.2-201ENST00000587099 1412 ntBASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 MIR6821-201ENST00000617625 74 ntBASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 AC231657.2-201ENST00000624556 255 ntBASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42SE2Q9NRR3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms