Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
CDCP1Q9H5V8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.22■□□□□ 0.51
CDCP1Q9H5V8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP1Q9H5V8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDCP1Q9H5V8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDCP1Q9H5V8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 AL020996.1-203ENST00000536896 2307 ntBASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 AP002982.1-201ENST00000492365 877 ntBASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDCP1Q9H5V8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDCP1Q9H5V8 FEM1AP1-201ENST00000431297 1995 ntBASIC18.21■□□□□ 0.5
CDCP1Q9H5V8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 MIR4785-201ENST00000585005 73 ntBASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 AP005212.1-201ENST00000581547 1997 ntBASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
CDCP1Q9H5V8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 FAM197Y1-201ENST00000421178 764 ntBASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 AL512408.1-201ENST00000569378 2000 ntBASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 CD177P1-201ENST00000606252 935 ntBASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 AC073195.1-201ENST00000607241 877 ntBASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.19■□□□□ 0.5
CDCP1Q9H5V8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
CDCP1Q9H5V8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms