Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NUCKS1Q9H1E3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.17■□□□□ 0.98
NUCKS1Q9H1E3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUCKS1Q9H1E3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 AC091874.3-201ENST00000512672 1195 ntBASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 MYC-209ENST00000641252 345 ntBASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUCKS1Q9H1E3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
NUCKS1Q9H1E3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 AC083880.1-201ENST00000608266 535 ntBASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUCKS1Q9H1E3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.13■□□□□ 0.97
NUCKS1Q9H1E3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
NUCKS1Q9H1E3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NUCKS1Q9H1E3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.12■□□□□ 0.97
NUCKS1Q9H1E3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms