Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 AC005332.8-201ENST00000622750 2735 ntBASIC16.81■□□□□ 0.28
CMTM3Q96MX0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMTM3Q96MX0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 EDA-201ENST00000338901 1233 ntBASIC16.8■□□□□ 0.28
CMTM3Q96MX0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 AP001330.3-201ENST00000520123 633 ntBASIC16.8■□□□□ 0.28
CMTM3Q96MX0 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 MKRN4P-201ENST00000444706 1521 ntBASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMTM3Q96MX0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 AC008406.3-201ENST00000620001 1374 ntBASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.79■□□□□ 0.28
CMTM3Q96MX0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMTM3Q96MX0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms