Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 BX664725.1-201ENST00000438252 379 ntBASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 SMUG1P1-201ENST00000590640 811 ntBASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHCHD1Q96BP2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 AC116050.2-201ENST00000612102 1779 ntBASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 AC061975.6-201ENST00000579045 1553 ntBASIC14.22□□□□□ -0.13
CHCHD1Q96BP2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 AC099791.2-201ENST00000605725 427 ntBASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 AC012313.1-201ENST00000593393 3059 ntBASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHCHD1Q96BP2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHCHD1Q96BP2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms