Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SNORA78-201ENST00000459373 127 ntBASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.59■□□□□ 0.41
FNDC9Q8TBE3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FNDC9Q8TBE3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AP001412.1-201ENST00000608405 714 ntBASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 AL049637.2-201ENST00000641778 930 ntBASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FNDC9Q8TBE3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 AC099778.1-201ENST00000568593 1911 ntBASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 MIR4497-201ENST00000583208 89 ntBASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FNDC9Q8TBE3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 YBX1P10-201ENST00000444752 975 ntBASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 AF186192.3-201ENST00000583427 947 ntBASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 AC007952.6-201ENST00000573168 2673 ntBASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 AC003957.1-201ENST00000625108 2673 ntBASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FNDC9Q8TBE3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms