Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 AC116562.4-201ENST00000641316 2276 ntBASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35BQ8NCS4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35BQ8NCS4 AC093484.2-201ENST00000580996 2166 ntBASIC20.7■□□□□ 0.91
TMEM35BQ8NCS4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 CD99P1-205ENST00000527459 561 ntBASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM35BQ8NCS4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 AC069544.1-201ENST00000609399 999 ntBASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TMEM35BQ8NCS4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 KRT18P16-201ENST00000510337 1294 ntBASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM35BQ8NCS4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM35BQ8NCS4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms