Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 HLA-G-202ENST00000376815 851 ntBASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 HLA-G-203ENST00000376818 1127 ntBASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC71LQ8N9Z2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC71LQ8N9Z2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 AL591742.1-201ENST00000604433 565 ntBASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71LQ8N9Z2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 PHGDH-210ENST00000641115 1638 ntBASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 AC123595.1-201ENST00000440769 1046 ntBASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 AC142381.2-201ENST00000566120 298 ntBASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71LQ8N9Z2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms