Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C3orf56Q8N813 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C3orf56Q8N813 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 KRT8P17-201ENST00000453110 1448 ntBASIC15.28■□□□□ 0.04
C3orf56Q8N813 AC096733.2-201ENST00000609937 1394 ntBASIC15.28■□□□□ 0.04
C3orf56Q8N813 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 AC012313.10-201ENST00000623509 926 ntBASIC15.28■□□□□ 0.04
C3orf56Q8N813 AL023973.1-201ENST00000624619 620 ntBASIC15.28■□□□□ 0.04
C3orf56Q8N813 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.28■□□□□ 0.04
C3orf56Q8N813 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C3orf56Q8N813 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.28■□□□□ 0.04
C3orf56Q8N813 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C3orf56Q8N813 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 GPALPP1-207ENST00000611650 899 ntBASIC15.27■□□□□ 0.04
C3orf56Q8N813 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
C3orf56Q8N813 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
C3orf56Q8N813 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
C3orf56Q8N813 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
C3orf56Q8N813 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.27■□□□□ 0.03
C3orf56Q8N813 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C3orf56Q8N813 AC092338.2-201ENST00000568827 1415 ntBASIC15.26■□□□□ 0.03
C3orf56Q8N813 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.26■□□□□ 0.03
C3orf56Q8N813 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 KRT18P16-201ENST00000510337 1294 ntBASIC15.26■□□□□ 0.03
C3orf56Q8N813 PRELID1P1-202ENST00000567272 903 ntBASIC15.26■□□□□ 0.03
C3orf56Q8N813 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C3orf56Q8N813 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C3orf56Q8N813 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 PTBP1P-201ENST00000554374 1601 ntBASIC15.25■□□□□ 0.03
C3orf56Q8N813 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.25■□□□□ 0.03
C3orf56Q8N813 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C3orf56Q8N813 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms