Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.06■□□□□ 0.8
PAF1Q8N7H5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 AL158047.1-201ENST00000445918 881 ntBASIC20.05■□□□□ 0.8
PAF1Q8N7H5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 C1QBPP2-201ENST00000528754 825 ntBASIC20.05■□□□□ 0.8
PAF1Q8N7H5 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 LINC01521-201ENST00000504184 1943 ntBASIC20.05■□□□□ 0.8
PAF1Q8N7H5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PAF1Q8N7H5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 BX119927.1-201ENST00000636596 1552 ntBASIC20.04■□□□□ 0.8
PAF1Q8N7H5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 AC239809.2-201ENST00000415381 517 ntBASIC20.04■□□□□ 0.8
PAF1Q8N7H5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 AC233263.1-201ENST00000578059 224 ntBASIC20.04■□□□□ 0.8
PAF1Q8N7H5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PAF1Q8N7H5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
PAF1Q8N7H5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms