Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
LYSMD2Q8IV50 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 AC233992.3-201ENST00000607491 485 ntBASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 AC093525.10-201ENST00000625130 1569 ntBASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD2Q8IV50 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 IGHV3-19-201ENST00000521488 291 ntBASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD2Q8IV50 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms