Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00242Q5T6M2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 AC005082.1-201ENST00000413042 2259 ntBASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00242Q5T6M2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 MFSD11-216ENST00000590393 1141 ntBASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 AC005837.3-201ENST00000612163 286 ntBASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 AC100791.3-201ENST00000617619 330 ntBASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 AC105020.6-201ENST00000621523 1217 ntBASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 AC006333.2-201ENST00000607957 2099 ntBASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00242Q5T6M2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 AC007322.4-201ENST00000509611 723 ntBASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00242Q5T6M2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms