Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDH13P55290 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDH13P55290 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH13P55290 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.1■□□□□ 0.65
CDH13P55290 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH13P55290 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH13P55290 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH13P55290 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CDH13P55290 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH13P55290 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH13P55290 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CDH13P55290 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH13P55290 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDH13P55290 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH13P55290 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDH13P55290 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH13P55290 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH13P55290 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDH13P55290 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH13P55290 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH13P55290 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH13P55290 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH13P55290 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.65
CDH13P55290 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CDH13P55290 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH13P55290 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH13P55290 MIPEPP3-201ENST00000412105 444 ntBASIC19.08■□□□□ 0.64
CDH13P55290 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH13P55290 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH13P55290 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CDH13P55290 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDH13P55290 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDH13P55290 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH13P55290 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDH13P55290 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH13P55290 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH13P55290 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH13P55290 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH13P55290 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH13P55290 TFP1-202ENST00000475455 1573 ntBASIC19.06■□□□□ 0.64
CDH13P55290 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH13P55290 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH13P55290 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDH13P55290 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDH13P55290 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH13P55290 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDH13P55290 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 MIR935-201ENST00000401179 91 ntBASIC19.06■□□□□ 0.64
CDH13P55290 DUSP5P2-201ENST00000426873 1033 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms