Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRGP48443 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.54■□□□□ 0.72
RXRGP48443 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
RXRGP48443 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RXRGP48443 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.54■□□□□ 0.72
RXRGP48443 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RXRGP48443 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RXRGP48443 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RXRGP48443 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RXRGP48443 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RXRGP48443 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RXRGP48443 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
RXRGP48443 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRGP48443 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RXRGP48443 UNC93B2-201ENST00000285383 730 ntBASIC19.53■□□□□ 0.72
RXRGP48443 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RXRGP48443 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.53■□□□□ 0.72
RXRGP48443 KSR1P1-201ENST00000446298 240 ntBASIC19.53■□□□□ 0.72
RXRGP48443 AC145285.6-201ENST00000604632 637 ntBASIC19.53■□□□□ 0.72
RXRGP48443 REXO1L10P-201ENST00000615707 1290 ntBASIC19.53■□□□□ 0.72
RXRGP48443 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRGP48443 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
RXRGP48443 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.53■□□□□ 0.72
RXRGP48443 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRGP48443 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.53■□□□□ 0.72
RXRGP48443 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RXRGP48443 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRGP48443 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.52■□□□□ 0.72
RXRGP48443 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RXRGP48443 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RXRGP48443 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 AC116562.2-201ENST00000507042 360 ntBASIC19.52■□□□□ 0.72
RXRGP48443 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.52■□□□□ 0.72
RXRGP48443 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RXRGP48443 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.52■□□□□ 0.72
RXRGP48443 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RXRGP48443 AC079598.2-202ENST00000546624 1451 ntBASIC19.52■□□□□ 0.72
RXRGP48443 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RXRGP48443 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RXRGP48443 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.52■□□□□ 0.71
RXRGP48443 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RXRGP48443 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
RXRGP48443 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRGP48443 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRGP48443 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRGP48443 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRGP48443 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRGP48443 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.51■□□□□ 0.71
RXRGP48443 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.51■□□□□ 0.71
RXRGP48443 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
RXRGP48443 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms