Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN3P26045 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN3P26045 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN3P26045 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PTPN3P26045 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PTPN3P26045 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN3P26045 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN3P26045 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN3P26045 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN3P26045 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN3P26045 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN3P26045 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
PTPN3P26045 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 AC026366.1-201ENST00000488803 879 ntBASIC19.92■□□□□ 0.78
PTPN3P26045 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTPN3P26045 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN3P26045 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN3P26045 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.91■□□□□ 0.78
PTPN3P26045 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN3P26045 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN3P26045 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PTPN3P26045 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN3P26045 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
PTPN3P26045 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PTPN3P26045 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PTPN3P26045 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PTPN3P26045 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN3P26045 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.91■□□□□ 0.78
PTPN3P26045 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
PTPN3P26045 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN3P26045 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PTPN3P26045 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN3P26045 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN3P26045 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PTPN3P26045 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN3P26045 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms