Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PHGDH-210ENST00000641115 1638 ntBASIC18.8■□□□□ 0.6
CAPN3P20807 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN3P20807 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN3P20807 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CAPN3P20807 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN3P20807 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 AC100791.3-201ENST00000617619 330 ntBASIC18.79■□□□□ 0.6
CAPN3P20807 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CAPN3P20807 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN3P20807 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.79■□□□□ 0.6
CAPN3P20807 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN3P20807 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.78■□□□□ 0.6
CAPN3P20807 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN3P20807 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.78■□□□□ 0.6
CAPN3P20807 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
CAPN3P20807 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CAPN3P20807 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CAPN3P20807 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN3P20807 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
CAPN3P20807 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN3P20807 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPN3P20807 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN3P20807 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN3P20807 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CAPN3P20807 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPN3P20807 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN3P20807 AF201337.1-201ENST00000520239 748 ntBASIC18.77■□□□□ 0.6
CAPN3P20807 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.77■□□□□ 0.6
CAPN3P20807 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN3P20807 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CAPN3P20807 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.77■□□□□ 0.6
CAPN3P20807 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CAPN3P20807 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CAPN3P20807 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CAPN3P20807 AL138781.2-201ENST00000617896 1843 ntBASIC18.77■□□□□ 0.59
CAPN3P20807 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.76■□□□□ 0.59
CAPN3P20807 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.76■□□□□ 0.59
CAPN3P20807 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.76■□□□□ 0.59
CAPN3P20807 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CAPN3P20807 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
CAPN3P20807 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.76■□□□□ 0.59
CAPN3P20807 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CAPN3P20807 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CAPN3P20807 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CAPN3P20807 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms