Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB3BP20337 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB3BP20337 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB3BP20337 AL136967.2-201ENST00000623968 743 ntBASIC17.12■□□□□ 0.33
RAB3BP20337 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB3BP20337 AC009113.1-201ENST00000570267 2443 ntBASIC17.12■□□□□ 0.33
RAB3BP20337 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3BP20337 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB3BP20337 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB3BP20337 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB3BP20337 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB3BP20337 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RAB3BP20337 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3BP20337 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB3BP20337 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3BP20337 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RAB3BP20337 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB3BP20337 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB3BP20337 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 AC006333.2-201ENST00000607957 2099 ntBASIC17.11■□□□□ 0.33
RAB3BP20337 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB3BP20337 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB3BP20337 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB3BP20337 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB3BP20337 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB3BP20337 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB3BP20337 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 AC019069.1-201ENST00000610008 1333 ntBASIC17.1■□□□□ 0.33
RAB3BP20337 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 CYP21A1P-202ENST00000354927 1481 ntBASIC17.1■□□□□ 0.33
RAB3BP20337 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 AL390961.4-201ENST00000623958 2535 ntBASIC17.1■□□□□ 0.33
RAB3BP20337 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3BP20337 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB3BP20337 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3BP20337 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3BP20337 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3BP20337 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms