Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.58■□□□□ 0.72
THRAP10827 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.58■□□□□ 0.72
THRAP10827 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.58■□□□□ 0.72
THRAP10827 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THRAP10827 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.57■□□□□ 0.72
THRAP10827 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.57■□□□□ 0.72
THRAP10827 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.57■□□□□ 0.72
THRAP10827 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.57■□□□□ 0.72
THRAP10827 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
THRAP10827 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.57■□□□□ 0.72
THRAP10827 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.57■□□□□ 0.72
THRAP10827 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 AC005332.7-201ENST00000614046 2005 ntBASIC19.57■□□□□ 0.72
THRAP10827 TMEM179-206ENST00000616017 1645 ntBASIC19.57■□□□□ 0.72
THRAP10827 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.57■□□□□ 0.72
THRAP10827 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
THRAP10827 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THRAP10827 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.56■□□□□ 0.72
THRAP10827 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.56■□□□□ 0.72
THRAP10827 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.56■□□□□ 0.72
THRAP10827 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 MIR2861-201ENST00000636310 90 ntBASIC19.56■□□□□ 0.72
THRAP10827 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.56■□□□□ 0.72
THRAP10827 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THRAP10827 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
THRAP10827 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
THRAP10827 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
THRAP10827 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.55■□□□□ 0.72
THRAP10827 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.55■□□□□ 0.72
THRAP10827 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.55■□□□□ 0.72
THRAP10827 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
THRAP10827 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
THRAP10827 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
THRAP10827 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
THRAP10827 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.54■□□□□ 0.72
THRAP10827 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
THRAP10827 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.54■□□□□ 0.72
THRAP10827 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.54■□□□□ 0.72
THRAP10827 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
THRAP10827 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THRAP10827 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms