Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC4O95801 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TTC4O95801 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC4O95801 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC4O95801 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TTC4O95801 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TTC4O95801 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TTC4O95801 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC4O95801 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.03■□□□□ 0.8
TTC4O95801 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC4O95801 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.03■□□□□ 0.8
TTC4O95801 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC4O95801 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TTC4O95801 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC4O95801 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TTC4O95801 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC4O95801 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
TTC4O95801 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
TTC4O95801 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 AL512625.2-201ENST00000417533 625 ntBASIC20.02■□□□□ 0.8
TTC4O95801 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 AC023632.3-201ENST00000521633 145 ntBASIC20.02■□□□□ 0.8
TTC4O95801 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC4O95801 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TTC4O95801 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC4O95801 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC4O95801 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TTC4O95801 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.02■□□□□ 0.79
TTC4O95801 AC010980.2-201ENST00000587099 1412 ntBASIC20.02■□□□□ 0.79
TTC4O95801 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TTC4O95801 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.01■□□□□ 0.79
TTC4O95801 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.01■□□□□ 0.79
TTC4O95801 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.01■□□□□ 0.79
TTC4O95801 MIR5787-201ENST00000611784 55 ntBASIC20.01■□□□□ 0.79
TTC4O95801 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC4O95801 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TTC4O95801 CROCCP3-202ENST00000420820 1947 ntBASIC20.01■□□□□ 0.79
TTC4O95801 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC4O95801 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC4O95801 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TTC4O95801 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TTC4O95801 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TTC4O95801 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TTC4O95801 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20■□□□□ 0.79
TTC4O95801 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 C2orf69P4-201ENST00000565394 541 ntBASIC20■□□□□ 0.79
TTC4O95801 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20■□□□□ 0.79
TTC4O95801 PHGDH-210ENST00000641115 1638 ntBASIC20■□□□□ 0.79
TTC4O95801 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20■□□□□ 0.79
TTC4O95801 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TTC4O95801 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20■□□□□ 0.79
TTC4O95801 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20■□□□□ 0.79
TTC4O95801 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC4O95801 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms