Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX6O95503 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CBX6O95503 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CBX6O95503 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX6O95503 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CBX6O95503 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX6O95503 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CBX6O95503 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CBX6O95503 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX6O95503 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX6O95503 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CBX6O95503 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX6O95503 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.42■□□□□ 0.7
CBX6O95503 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CBX6O95503 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CBX6O95503 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX6O95503 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX6O95503 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX6O95503 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX6O95503 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX6O95503 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX6O95503 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.41■□□□□ 0.7
CBX6O95503 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX6O95503 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CBX6O95503 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CBX6O95503 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX6O95503 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX6O95503 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 CROCCP3-202ENST00000420820 1947 ntBASIC19.41■□□□□ 0.7
CBX6O95503 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX6O95503 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 AC009113.1-201ENST00000570267 2443 ntBASIC19.4■□□□□ 0.7
CBX6O95503 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX6O95503 POU5F1P3-201ENST00000428824 1078 ntBASIC19.4■□□□□ 0.7
CBX6O95503 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.4■□□□□ 0.7
CBX6O95503 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CBX6O95503 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX6O95503 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX6O95503 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX6O95503 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CBX6O95503 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CBX6O95503 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CBX6O95503 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CBX6O95503 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.39■□□□□ 0.69
CBX6O95503 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CBX6O95503 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CBX6O95503 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms