Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.56■□□□□ 0.72
GPC4O75487 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.56■□□□□ 0.72
GPC4O75487 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GPC4O75487 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GPC4O75487 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC4O75487 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GPC4O75487 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC4O75487 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GPC4O75487 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC4O75487 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC4O75487 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.55■□□□□ 0.72
GPC4O75487 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GPC4O75487 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC4O75487 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.55■□□□□ 0.72
GPC4O75487 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.55■□□□□ 0.72
GPC4O75487 KRT18P6-201ENST00000555540 1265 ntBASIC19.55■□□□□ 0.72
GPC4O75487 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GPC4O75487 AC018445.3-201ENST00000624177 1945 ntBASIC19.55■□□□□ 0.72
GPC4O75487 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.54■□□□□ 0.72
GPC4O75487 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.54■□□□□ 0.72
GPC4O75487 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.54■□□□□ 0.72
GPC4O75487 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.54■□□□□ 0.72
GPC4O75487 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.54■□□□□ 0.72
GPC4O75487 AC006557.6-201ENST00000623071 864 ntBASIC19.54■□□□□ 0.72
GPC4O75487 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GPC4O75487 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GPC4O75487 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC4O75487 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.53■□□□□ 0.72
GPC4O75487 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.53■□□□□ 0.72
GPC4O75487 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.53■□□□□ 0.72
GPC4O75487 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
GPC4O75487 TMEM179-206ENST00000616017 1645 ntBASIC19.53■□□□□ 0.72
GPC4O75487 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
GPC4O75487 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC4O75487 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC4O75487 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GPC4O75487 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC4O75487 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC4O75487 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC4O75487 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.52■□□□□ 0.72
GPC4O75487 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC4O75487 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.52■□□□□ 0.72
GPC4O75487 UNC93B5-201ENST00000530315 699 ntBASIC19.52■□□□□ 0.72
GPC4O75487 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC4O75487 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
GPC4O75487 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC4O75487 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC4O75487 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
GPC4O75487 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC4O75487 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.52■□□□□ 0.71
GPC4O75487 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC4O75487 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC4O75487 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GPC4O75487 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms