Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)13.4□□□□□ -0.264e-6■■□□□ 11.4
DKC1O60832 RPL34-207ENST00000506397 549 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.274e-6■■□□□ 11.4
DKC1O60832 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.99□□□□□ -0.338e-7■■□□□ 11.4
DKC1O60832 CASZ1-209ENST00000496432 3279 ntTSL 212.02□□□□□ -0.484e-6■■□□□ 11.4
DKC1O60832 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.684e-6■■□□□ 11.4
DKC1O60832 RPL34-205ENST00000503574 2627 ntTSL 29.99□□□□□ -0.814e-6■■□□□ 11.4
DKC1O60832 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC9.7□□□□□ -0.864e-6■■□□□ 11.4
DKC1O60832 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.97□□□□□ -0.974e-6■■□□□ 11.4
DKC1O60832 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.034e-6■■□□□ 11.4
DKC1O60832 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.034e-6■■□□□ 11.4
DKC1O60832 RPL34-206ENST00000504231 629 ntTSL 1 (best)8.61□□□□□ -1.034e-6■■□□□ 11.4
DKC1O60832 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.084e-6■■□□□ 11.4
DKC1O60832 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.15□□□□□ -1.14e-6■■□□□ 11.4
DKC1O60832 SMARCC1-202ENST00000425518 3827 ntTSL 27.91□□□□□ -1.141e-11■■□□□ 11.4
DKC1O60832 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.45□□□□□ -1.384e-6■■□□□ 11.4
DKC1O60832 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.424e-6■■□□□ 11.4
DKC1O60832 ASAP1-208ENST00000520625 606 ntTSL 35.95□□□□□ -1.464e-6■■□□□ 11.4
DKC1O60832 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.658e-7■■□□□ 11.4
DKC1O60832 G2E3-203ENST00000544007 1003 ntTSL 24.46□□□□□ -1.78e-7■■□□□ 11.4
DKC1O60832 FBXO11-204ENST00000424163 560 ntTSL 42.64□□□□□ -1.994e-6■■□□□ 11.4
DKC1O60832 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.91■□□□□ 0.141e-323■■□□□ 11.4
DKC1O60832 RPL3-215ENST00000481985 557 ntTSL 215.17■□□□□ 0.021e-323■■□□□ 11.4
DKC1O60832 RPL3-213ENST00000471290 481 ntTSL 212.06□□□□□ -0.481e-323■■□□□ 11.4
DKC1O60832 SNORD83A-201ENST00000386747 95 ntBASIC10.17□□□□□ -0.781e-323■■□□□ 11.4
DKC1O60832 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.74■■□□□ 1.232e-6■■□□□ 11.4
DKC1O60832 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.58■■□□□ 1.042e-6■■□□□ 11.4
DKC1O60832 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.022e-6■■□□□ 11.4
DKC1O60832 SYTL1-204ENST00000483926 2525 ntTSL 219.57■□□□□ 0.722e-6■■□□□ 11.4
DKC1O60832 SYTL1-202ENST00000473280 312 ntTSL 315.21■□□□□ 0.032e-6■■□□□ 11.4
DKC1O60832 FN1-220ENST00000480024 576 ntTSL 27.47□□□□□ -1.212e-75■□□□□ 11.3
DKC1O60832 HNRNPLL-211ENST00000498516 655 ntTSL 324.15■■□□□ 1.463e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.96■■□□□ 1.273e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.72■■□□□ 1.073e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.31■■□□□ 13e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.21■□□□□ 0.513e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.17■□□□□ 0.343e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.09■□□□□ 0.173e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 03e-6■□□□□ 11.3
DKC1O60832 HNRNPLL-207ENST00000425682 570 ntTSL 311.82□□□□□ -0.523e-6■□□□□ 11.3
DKC1O60832 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.388e-12■□□□□ 11.3
DKC1O60832 PLOD1-209ENST00000491536 639 ntTSL 311.57□□□□□ -0.568e-12■□□□□ 11.3
DKC1O60832 HLA-B-258ENST00000640615 240 ntBASIC9.8□□□□□ -0.848e-8■□□□□ 11.3
DKC1O60832 FN1-219ENST00000474036 1058 ntTSL 25.36□□□□□ -1.555e-75■□□□□ 11.3
DKC1O60832 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.51e-6■□□□□ 11.3
DKC1O60832 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.81e-7■□□□□ 11.3
DKC1O60832 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.351e-323■□□□□ 11.3
DKC1O60832 SNORD116-25-201ENST00000516517 92 ntBASIC0.16□□□□□ -2.382e-6■□□□□ 11.2
DKC1O60832 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.17■■□□□ 1.141e-323■□□□□ 11.2
DKC1O60832 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.391e-323■□□□□ 11.2
DKC1O60832 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.27■□□□□ 0.361e-323■□□□□ 11.2
DKC1O60832 NAP1L4-210ENST00000492685 850 ntTSL 57.43□□□□□ -1.221e-323■□□□□ 11.2
DKC1O60832 NAP1L4-215ENST00000528363 685 ntTSL 26.67□□□□□ -1.341e-323■□□□□ 11.2
DKC1O60832 NAP1L4-220ENST00000532325 526 ntTSL 56.16□□□□□ -1.421e-323■□□□□ 11.2
DKC1O60832 NAP1L4-204ENST00000448187 888 ntTSL 54.37□□□□□ -1.711e-323■□□□□ 11.2
DKC1O60832 SNORA54-201ENST00000384281 123 ntBASIC3.37□□□□□ -1.871e-323■□□□□ 11.2
DKC1O60832 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC11.16□□□□□ -0.621e-323■□□□□ 11.2
DKC1O60832 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC9.93□□□□□ -0.821e-323■□□□□ 11.2
DKC1O60832 SNHG26-203ENST00000432668 574 ntTSL 36.83□□□□□ -1.321e-323■□□□□ 11.2
DKC1O60832 SNORD93-201ENST00000408813 74 ntBASIC0.31□□□□□ -2.361e-323■□□□□ 11.2
DKC1O60832 EIF4A1-234ENST00000584798 1440 nt9.66□□□□□ -0.861e-323■□□□□ 11.2
DKC1O60832 C9orf3-207ENST00000445181 873 ntTSL 326.87■■□□□ 1.892e-9■□□□□ 11.2
DKC1O60832 C9orf3-215ENST00000478473 895 ntTSL 326.32■■□□□ 1.82e-9■□□□□ 11.2
DKC1O60832 C9orf3-216ENST00000478603 802 ntTSL 225.55■■□□□ 1.682e-9■□□□□ 11.2
DKC1O60832 C9orf3-213ENST00000471978 478 ntTSL 225.27■■□□□ 1.642e-9■□□□□ 11.2
DKC1O60832 C9orf3-211ENST00000463372 919 ntTSL 314.66□□□□□ -0.062e-9■□□□□ 11.2
DKC1O60832 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC10.02□□□□□ -0.812e-9■□□□□ 11.2
DKC1O60832 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.862e-9■□□□□ 11.2
DKC1O60832 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.18□□□□□ -0.942e-9■□□□□ 11.2
DKC1O60832 NHLRC3-205ENST00000485407 623 ntTSL 36.04□□□□□ -1.442e-9■□□□□ 11.2
DKC1O60832 HSPA8-220ENST00000533238 465 ntTSL 37.16□□□□□ -1.261e-88■□□□□ 11.1
DKC1O60832 SNORD14D-201ENST00000384390 87 ntBASIC2.3□□□□□ -2.041e-88■□□□□ 11.1
DKC1O60832 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 14e-11■□□□□ 11.1
DKC1O60832 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.21■□□□□ 0.994e-11■□□□□ 11.1
DKC1O60832 KANSL1-223ENST00000639150 1815 ntTSL 517.89■□□□□ 0.454e-11■□□□□ 11.1
DKC1O60832 KANSL1-203ENST00000571698 2276 ntTSL 516.32■□□□□ 0.24e-11■□□□□ 11.1
DKC1O60832 KANSL1-229ENST00000639531 2731 ntTSL 513.16□□□□□ -0.34e-11■□□□□ 11.1
DKC1O60832 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.324e-11■□□□□ 11.1
DKC1O60832 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.354e-11■□□□□ 11.1
DKC1O60832 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC12.84□□□□□ -0.354e-11■□□□□ 11.1
DKC1O60832 KANSL1-217ENST00000638269 3365 ntTSL 510.83□□□□□ -0.684e-11■□□□□ 11.1
DKC1O60832 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.774e-11■□□□□ 11.1
DKC1O60832 KANSL1-226ENST00000639375 3392 ntTSL 59.19□□□□□ -0.944e-11■□□□□ 11.1
DKC1O60832 KANSL1-231ENST00000639853 1425 ntTSL 58.63□□□□□ -1.034e-11■□□□□ 11.1
DKC1O60832 KANSL1-216ENST00000577114 629 ntTSL 58.47□□□□□ -1.054e-11■□□□□ 11.1
DKC1O60832 EXO1-203ENST00000423131 950 ntTSL 518.85■□□□□ 0.613e-9■□□□□ 11.1
DKC1O60832 EXO1-207ENST00000493702 783 ntTSL 511.65□□□□□ -0.543e-9■□□□□ 11.1
DKC1O60832 EXO1-206ENST00000469419 754 ntTSL 311.56□□□□□ -0.563e-9■□□□□ 11.1
DKC1O60832 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.733e-9■□□□□ 11.1
DKC1O60832 EXO1-204ENST00000437497 593 ntTSL 36.92□□□□□ -1.33e-9■□□□□ 11.1
DKC1O60832 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.43e-9■□□□□ 11.1
DKC1O60832 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.473e-9■□□□□ 11.1
DKC1O60832 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.178e-10■□□□□ 11.1
DKC1O60832 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.85□□□□□ -0.038e-10■□□□□ 11.1
DKC1O60832 WHRN-204ENST00000374059 3278 ntTSL 2 BASIC11.53□□□□□ -0.568e-10■□□□□ 11.1
DKC1O60832 ALB-210ENST00000504043 422 ntTSL 25.07□□□□□ -1.64e-79■□□□□ 11.1
DKC1O60832 ALB-206ENST00000484992 693 ntTSL 23.78□□□□□ -1.84e-79■□□□□ 11.1
DKC1O60832 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.083e-18■□□□□ 11
DKC1O60832 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.033e-18■□□□□ 11
DKC1O60832 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.193e-18■□□□□ 11
DKC1O60832 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.193e-18■□□□□ 11
Retrieved 100 of 8,567 protein–RNA pairs in 36.9 ms