Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRAMEF11O60813 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF11O60813 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF11O60813 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF11O60813 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.86■□□□□ 0.77
PRAMEF11O60813 AL158211.5-201ENST00000623583 2518 ntBASIC19.85■□□□□ 0.77
PRAMEF11O60813 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRAMEF11O60813 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.85■□□□□ 0.77
PRAMEF11O60813 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 AL353807.1-201ENST00000427475 662 ntBASIC19.84■□□□□ 0.77
PRAMEF11O60813 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 AL353708.3-201ENST00000610272 989 ntBASIC19.84■□□□□ 0.77
PRAMEF11O60813 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PRAMEF11O60813 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEF11O60813 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms