Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 TFP1-202ENST00000475455 1573 ntBASIC18.36■□□□□ 0.53
PRAMEF2O60811 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 RARRES2P10-201ENST00000564312 460 ntBASIC18.36■□□□□ 0.53
PRAMEF2O60811 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 AC073912.3-201ENST00000624414 853 ntBASIC18.36■□□□□ 0.53
PRAMEF2O60811 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 AL049637.2-201ENST00000641778 930 ntBASIC18.36■□□□□ 0.53
PRAMEF2O60811 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF2O60811 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEF2O60811 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.35■□□□□ 0.53
PRAMEF2O60811 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF2O60811 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF2O60811 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 TSPY7P-201ENST00000431358 1114 ntBASIC18.34■□□□□ 0.53
PRAMEF2O60811 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF2O60811 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF2O60811 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF2O60811 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF2O60811 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF2O60811 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF2O60811 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms