Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TSPAN3O60637 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.17■□□□□ 0.82
TSPAN3O60637 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.16■□□□□ 0.82
TSPAN3O60637 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
TSPAN3O60637 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TSPAN3O60637 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TSPAN3O60637 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.16■□□□□ 0.82
TSPAN3O60637 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 KSR1P1-201ENST00000446298 240 ntBASIC20.16■□□□□ 0.82
TSPAN3O60637 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.16■□□□□ 0.82
TSPAN3O60637 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.16■□□□□ 0.82
TSPAN3O60637 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TSPAN3O60637 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.16■□□□□ 0.82
TSPAN3O60637 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN3O60637 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.15■□□□□ 0.82
TSPAN3O60637 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.15■□□□□ 0.82
TSPAN3O60637 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TSPAN3O60637 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.15■□□□□ 0.82
TSPAN3O60637 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.15■□□□□ 0.82
TSPAN3O60637 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 KRT16P1-201ENST00000399124 1418 ntBASIC20.15■□□□□ 0.82
TSPAN3O60637 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.15■□□□□ 0.82
TSPAN3O60637 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 TCF3P1-201ENST00000423021 1937 ntBASIC20.15■□□□□ 0.82
TSPAN3O60637 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN3O60637 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN3O60637 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN3O60637 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.14■□□□□ 0.82
TSPAN3O60637 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN3O60637 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TSPAN3O60637 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.14■□□□□ 0.81
TSPAN3O60637 LINC01521-201ENST00000504184 1943 ntBASIC20.14■□□□□ 0.81
TSPAN3O60637 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TSPAN3O60637 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TSPAN3O60637 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN3O60637 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TSPAN3O60637 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.14■□□□□ 0.81
TSPAN3O60637 BX088651.1-201ENST00000540551 451 ntBASIC20.14■□□□□ 0.81
TSPAN3O60637 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.14■□□□□ 0.81
TSPAN3O60637 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.14■□□□□ 0.81
TSPAN3O60637 REXO1L12P-201ENST00000622156 912 ntBASIC20.14■□□□□ 0.81
TSPAN3O60637 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TSPAN3O60637 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TSPAN3O60637 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.14■□□□□ 0.81
TSPAN3O60637 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
TSPAN3O60637 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
TSPAN3O60637 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN3O60637 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TSPAN3O60637 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.13■□□□□ 0.81
TSPAN3O60637 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.13■□□□□ 0.81
TSPAN3O60637 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN3O60637 NUDT16P1-203ENST00000513809 620 ntBASIC20.13■□□□□ 0.81
TSPAN3O60637 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.13■□□□□ 0.81
TSPAN3O60637 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms