Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 AC091799.1-201ENST00000422823 811 ntBASIC13.37□□□□□ -0.27
NDUFA1O15239 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NDUFA1O15239 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
NDUFA1O15239 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.37□□□□□ -0.27
NDUFA1O15239 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NDUFA1O15239 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.36□□□□□ -0.27
NDUFA1O15239 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NDUFA1O15239 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.36□□□□□ -0.27
NDUFA1O15239 AC004854.2-201ENST00000608450 1441 ntBASIC13.36□□□□□ -0.27
NDUFA1O15239 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NDUFA1O15239 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.36□□□□□ -0.27
NDUFA1O15239 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.36□□□□□ -0.27
NDUFA1O15239 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NDUFA1O15239 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NDUFA1O15239 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.35□□□□□ -0.27
NDUFA1O15239 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NDUFA1O15239 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.35□□□□□ -0.27
NDUFA1O15239 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NDUFA1O15239 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
NDUFA1O15239 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.35□□□□□ -0.27
NDUFA1O15239 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
NDUFA1O15239 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms