Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGKV3D-20A0A0C4DH25 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGKV3D-20A0A0C4DH25 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IGKV3D-20A0A0C4DH25 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 MIR638-201ENST00000385237 100 ntBASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 AC007322.4-201ENST00000509611 723 ntBASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 NEFHP1-201ENST00000412845 2629 ntBASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
IGKV3D-20A0A0C4DH25 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 MCRIP2P1-201ENST00000394346 511 ntBASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 AC013268.1-206ENST00000638368 961 ntBASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 AC112229.1-201ENST00000639295 961 ntBASIC14.51□□□□□ -0.09
IGKV3D-20A0A0C4DH25 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms