Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF630-201ENST00000276054 2791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MATN2-201ENST00000254898 4106 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SUFU-203ENST00000423559 2601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 LILRB5-201ENST00000316219 3236 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL23-201ENST00000245857 588 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 U3.7-201ENST00000363668 216 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.361-201ENST00000365515 120 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MIR766-201ENST00000390223 111 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL022722.1-201ENST00000406333 582 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU4-69P-201ENST00000410677 143 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RNA5SP115-201ENST00000411160 107 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SSXP9-201ENST00000417503 292 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 FABP5P15-201ENST00000453566 214 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL049873.1-201ENST00000480540 376 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC083841.3-202ENST00000519411 349 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 OR5M6P-201ENST00000530227 937 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC090844.3-202ENST00000584649 535 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL365205.2-201ENST00000594586 68 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL670729.2-201ENST00000602963 480 ntTSL 4 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-84P-201ENST00000607737 102 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL627230.2-201ENST00000613254 655 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 HIST1H3A-201ENST00000613854 411 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC015914.2-201ENST00000618167 288 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PDE4DIP-247ENST00000618504 567 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 POLR3G-201ENST00000399107 3285 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 FHAD1-202ENST00000358897 5090 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC00485-201ENST00000547179 3722 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AL355877.1-201ENST00000428812 2108 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 UST-201ENST00000367463 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC106820.4-201ENST00000561847 5616 ntBASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 CREM-208ENST00000361599 2170 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 GRIK1-205ENST00000399909 3427 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 CELF2-201ENST00000354897 1754 ntTSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 GRAP2-201ENST00000344138 3893 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 SGSM1-202ENST00000400359 4317 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 ACTC1-201ENST00000290378 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP3-3Q9BYR6 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 FUT6-202ENST00000318336 3137 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 KIRREL3-201ENST00000525144 3808 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 JAK3-207ENST00000534444 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ZSCAN29-204ENST00000562072 2345 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01346-201ENST00000412674 3242 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 STRADA-241ENST00000639835 2130 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 CIC-204ENST00000572681 8218 ntTSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 PDILT-201ENST00000302451 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 KIF9-201ENST00000265529 3311 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
KRTAP3-3Q9BYR6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms