RNA–Protein interactions for RNA: ENST00000412674.1

LINC01346-201, Transcript of long intergenic non-protein coding RNA 1346, humanhuman

TSL 2 BASIC

Gene LINC01346, Length 3,242 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01346-201ENST00000412674 NISCHQ9Y2I1 1504 aa20.59■□□□□ 0.89
LINC01346-201ENST00000412674 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
LINC01346-201ENST00000412674 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
LINC01346-201ENST00000412674 HRCP23327 699 aa17.58■□□□□ 0.41
LINC01346-201ENST00000412674 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
LINC01346-201ENST00000412674 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
LINC01346-201ENST00000412674 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
LINC01346-201ENST00000412674 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
LINC01346-201ENST00000412674 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
LINC01346-201ENST00000412674 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
LINC01346-201ENST00000412674 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
LINC01346-201ENST00000412674 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
LINC01346-201ENST00000412674 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
LINC01346-201ENST00000412674 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
LINC01346-201ENST00000412674 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
LINC01346-201ENST00000412674 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
LINC01346-201ENST00000412674 ABCC9O60706 1549 aa16.58■□□□□ 0.24
LINC01346-201ENST00000412674 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
LINC01346-201ENST00000412674 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
LINC01346-201ENST00000412674 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
LINC01346-201ENST00000412674 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
LINC01346-201ENST00000412674 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
LINC01346-201ENST00000412674 SCRIBQ14160 1630 aa16.27■□□□□ 0.19
LINC01346-201ENST00000412674 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
LINC01346-201ENST00000412674 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
LINC01346-201ENST00000412674 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
LINC01346-201ENST00000412674 NACADO15069 1562 aa16.08■□□□□ 0.16
LINC01346-201ENST00000412674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
LINC01346-201ENST00000412674 CENPBP07199 599 aaPredicted RBP16.07■□□□□ 0.16
LINC01346-201ENST00000412674 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
LINC01346-201ENST00000412674 MYT1Q01538 1121 aa16.05■□□□□ 0.16
LINC01346-201ENST00000412674 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
LINC01346-201ENST00000412674 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
LINC01346-201ENST00000412674 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
LINC01346-201ENST00000412674 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
LINC01346-201ENST00000412674 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
LINC01346-201ENST00000412674 WIZO95785 1651 aa15.91■□□□□ 0.14
LINC01346-201ENST00000412674 BAZ1AQ9NRL2 1556 aaPredicted RBP15.89■□□□□ 0.13
LINC01346-201ENST00000412674 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
LINC01346-201ENST00000412674 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
LINC01346-201ENST00000412674 ZNF316A6NFI3 1004 aaPredicted RBP15.81■□□□□ 0.12
LINC01346-201ENST00000412674 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
LINC01346-201ENST00000412674 EEA1Q15075 1411 aa15.75■□□□□ 0.11
LINC01346-201ENST00000412674 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
LINC01346-201ENST00000412674 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
LINC01346-201ENST00000412674 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
LINC01346-201ENST00000412674 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
LINC01346-201ENST00000412674 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
LINC01346-201ENST00000412674 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC01346-201ENST00000412674 SOGA1O94964 1423 aa15.66■□□□□ 0.1
LINC01346-201ENST00000412674 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
LINC01346-201ENST00000412674 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
LINC01346-201ENST00000412674 YTHDC1Q96MU7 727 aaKnown RBP15.64■□□□□ 0.09
LINC01346-201ENST00000412674 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
LINC01346-201ENST00000412674 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
LINC01346-201ENST00000412674 MIER1Q8N108 512 aa15.59■□□□□ 0.09
LINC01346-201ENST00000412674 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
LINC01346-201ENST00000412674 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
LINC01346-201ENST00000412674 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
LINC01346-201ENST00000412674 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
LINC01346-201ENST00000412674 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
LINC01346-201ENST00000412674 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
LINC01346-201ENST00000412674 CLIP1P30622 1438 aa15.45■□□□□ 0.06
LINC01346-201ENST00000412674 KIF21BO75037 1637 aa15.45■□□□□ 0.06
LINC01346-201ENST00000412674 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
LINC01346-201ENST00000412674 APLP2Q06481 763 aa15.44■□□□□ 0.06
LINC01346-201ENST00000412674 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LINC01346-201ENST00000412674 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
LINC01346-201ENST00000412674 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
LINC01346-201ENST00000412674 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
LINC01346-201ENST00000412674 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
LINC01346-201ENST00000412674 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
LINC01346-201ENST00000412674 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
LINC01346-201ENST00000412674 ERICH3Q5RHP9 1530 aa15.15■□□□□ 0.02
LINC01346-201ENST00000412674 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
LINC01346-201ENST00000412674 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
LINC01346-201ENST00000412674 CUX2O14529 1486 aa15.13■□□□□ 0.01
LINC01346-201ENST00000412674 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
LINC01346-201ENST00000412674 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
LINC01346-201ENST00000412674 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
LINC01346-201ENST00000412674 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
LINC01346-201ENST00000412674 ANP32EQ9BTT0 268 aa15.1■□□□□ 0.01
LINC01346-201ENST00000412674 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
LINC01346-201ENST00000412674 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
LINC01346-201ENST00000412674 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
LINC01346-201ENST00000412674 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
LINC01346-201ENST00000412674 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
LINC01346-201ENST00000412674 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.01
LINC01346-201ENST00000412674 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
LINC01346-201ENST00000412674 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
LINC01346-201ENST00000412674 ITGAEP38570 1179 aa14.93□□□□□ -0.02
LINC01346-201ENST00000412674 FKBP8Q14318 412 aa14.93□□□□□ -0.02
LINC01346-201ENST00000412674 ARHGAP35Q9NRY4 1499 aa14.93□□□□□ -0.02
LINC01346-201ENST00000412674 BCANQ96GW7 911 aa14.93□□□□□ -0.02
LINC01346-201ENST00000412674 NEFLP07196 543 aa14.92□□□□□ -0.02
LINC01346-201ENST00000412674 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
LINC01346-201ENST00000412674 TIMELESSQ9UNS1 1208 aa14.9□□□□□ -0.02
LINC01346-201ENST00000412674 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
LINC01346-201ENST00000412674 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
LINC01346-201ENST00000412674 DDX10Q13206 875 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms