RNA–Protein interactions for RNA: ENST00000525144.6

KIRREL3-201, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIRREL3, Length 3,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-201ENST00000525144 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
KIRREL3-201ENST00000525144 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
KIRREL3-201ENST00000525144 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
KIRREL3-201ENST00000525144 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
KIRREL3-201ENST00000525144 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
KIRREL3-201ENST00000525144 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
KIRREL3-201ENST00000525144 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
KIRREL3-201ENST00000525144 ABCC9O60706 1549 aa18.9■□□□□ 0.62
KIRREL3-201ENST00000525144 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
KIRREL3-201ENST00000525144 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
KIRREL3-201ENST00000525144 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
KIRREL3-201ENST00000525144 NACADO15069 1562 aa18.42■□□□□ 0.54
KIRREL3-201ENST00000525144 MYT1Q01538 1121 aa18.35■□□□□ 0.53
KIRREL3-201ENST00000525144 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
KIRREL3-201ENST00000525144 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
KIRREL3-201ENST00000525144 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
KIRREL3-201ENST00000525144 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
KIRREL3-201ENST00000525144 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
KIRREL3-201ENST00000525144 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
KIRREL3-201ENST00000525144 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
KIRREL3-201ENST00000525144 WIZO95785 1651 aa18■□□□□ 0.47
KIRREL3-201ENST00000525144 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
KIRREL3-201ENST00000525144 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
KIRREL3-201ENST00000525144 LOC105371045A0A1W2PR82 267 aa17.82■□□□□ 0.44
KIRREL3-201ENST00000525144 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
KIRREL3-201ENST00000525144 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
KIRREL3-201ENST00000525144 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
KIRREL3-201ENST00000525144 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
KIRREL3-201ENST00000525144 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
KIRREL3-201ENST00000525144 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
KIRREL3-201ENST00000525144 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
KIRREL3-201ENST00000525144 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
KIRREL3-201ENST00000525144 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
KIRREL3-201ENST00000525144 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
KIRREL3-201ENST00000525144 PPARGC1BQ86YN6 1023 aaKnown RBP17.44■□□□□ 0.38
KIRREL3-201ENST00000525144 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
KIRREL3-201ENST00000525144 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
KIRREL3-201ENST00000525144 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
KIRREL3-201ENST00000525144 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
KIRREL3-201ENST00000525144 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
KIRREL3-201ENST00000525144 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
KIRREL3-201ENST00000525144 HRCP23327 699 aa17.24■□□□□ 0.35
KIRREL3-201ENST00000525144 ERICH6Q7L0X2 663 aa17.23■□□□□ 0.35
KIRREL3-201ENST00000525144 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
KIRREL3-201ENST00000525144 SOGA1O94964 1423 aa17.17■□□□□ 0.34
KIRREL3-201ENST00000525144 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
KIRREL3-201ENST00000525144 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
KIRREL3-201ENST00000525144 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
KIRREL3-201ENST00000525144 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
KIRREL3-201ENST00000525144 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
KIRREL3-201ENST00000525144 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
KIRREL3-201ENST00000525144 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
KIRREL3-201ENST00000525144 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
KIRREL3-201ENST00000525144 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
KIRREL3-201ENST00000525144 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
KIRREL3-201ENST00000525144 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
KIRREL3-201ENST00000525144 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
KIRREL3-201ENST00000525144 TOP2BQ02880 1626 aa16.91■□□□□ 0.3
KIRREL3-201ENST00000525144 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
KIRREL3-201ENST00000525144 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
KIRREL3-201ENST00000525144 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
KIRREL3-201ENST00000525144 CFTRP13569 1480 aa16.85■□□□□ 0.29
KIRREL3-201ENST00000525144 CUX1P39880 1505 aa16.84■□□□□ 0.29
KIRREL3-201ENST00000525144 EEA1Q15075 1411 aa16.82■□□□□ 0.28
KIRREL3-201ENST00000525144 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
KIRREL3-201ENST00000525144 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
KIRREL3-201ENST00000525144 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
KIRREL3-201ENST00000525144 KIF21BO75037 1637 aa16.77■□□□□ 0.27
KIRREL3-201ENST00000525144 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
KIRREL3-201ENST00000525144 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
KIRREL3-201ENST00000525144 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
KIRREL3-201ENST00000525144 NESP48681 1621 aa16.71■□□□□ 0.27
KIRREL3-201ENST00000525144 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
KIRREL3-201ENST00000525144 CLIP1P30622 1438 aa16.64■□□□□ 0.25
KIRREL3-201ENST00000525144 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
KIRREL3-201ENST00000525144 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
KIRREL3-201ENST00000525144 APLP2Q06481 763 aa16.6■□□□□ 0.25
KIRREL3-201ENST00000525144 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
KIRREL3-201ENST00000525144 CUX2O14529 1486 aa16.59■□□□□ 0.25
KIRREL3-201ENST00000525144 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
KIRREL3-201ENST00000525144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
KIRREL3-201ENST00000525144 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
KIRREL3-201ENST00000525144 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
KIRREL3-201ENST00000525144 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
KIRREL3-201ENST00000525144 IGF1RP08069 1367 aa16.47■□□□□ 0.23
KIRREL3-201ENST00000525144 WDR97A6NE52 1622 aa16.46■□□□□ 0.23
KIRREL3-201ENST00000525144 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
KIRREL3-201ENST00000525144 CCER1Q8TC90 406 aaPredicted RBP16.45■□□□□ 0.22
KIRREL3-201ENST00000525144 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
KIRREL3-201ENST00000525144 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
KIRREL3-201ENST00000525144 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
KIRREL3-201ENST00000525144 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
KIRREL3-201ENST00000525144 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
KIRREL3-201ENST00000525144 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
KIRREL3-201ENST00000525144 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
KIRREL3-201ENST00000525144 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
KIRREL3-201ENST00000525144 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
KIRREL3-201ENST00000525144 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
KIRREL3-201ENST00000525144 ACIN1Q9UKV3 1341 aaKnown RBP16.39■□□□□ 0.21
KIRREL3-201ENST00000525144 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms