RNA–Protein interactions for RNA: ENST00000400359.4

SGSM1-202, Transcript of small G protein signaling modulator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SGSM1, Length 4,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM1-202ENST00000400359 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
SGSM1-202ENST00000400359 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
SGSM1-202ENST00000400359 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
SGSM1-202ENST00000400359 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
SGSM1-202ENST00000400359 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
SGSM1-202ENST00000400359 ABCC9O60706 1549 aa19.64■□□□□ 0.73
SGSM1-202ENST00000400359 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
SGSM1-202ENST00000400359 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
SGSM1-202ENST00000400359 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
SGSM1-202ENST00000400359 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
SGSM1-202ENST00000400359 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
SGSM1-202ENST00000400359 NACADO15069 1562 aa18.73■□□□□ 0.59
SGSM1-202ENST00000400359 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
SGSM1-202ENST00000400359 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
SGSM1-202ENST00000400359 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
SGSM1-202ENST00000400359 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
SGSM1-202ENST00000400359 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.51
SGSM1-202ENST00000400359 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
SGSM1-202ENST00000400359 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
SGSM1-202ENST00000400359 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.5
SGSM1-202ENST00000400359 APLP2Q06481 763 aa18.14■□□□□ 0.49
SGSM1-202ENST00000400359 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
SGSM1-202ENST00000400359 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
SGSM1-202ENST00000400359 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
SGSM1-202ENST00000400359 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
SGSM1-202ENST00000400359 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SGSM1-202ENST00000400359 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
SGSM1-202ENST00000400359 WIZO95785 1651 aa17.75■□□□□ 0.43
SGSM1-202ENST00000400359 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
SGSM1-202ENST00000400359 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
SGSM1-202ENST00000400359 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
SGSM1-202ENST00000400359 FBLN2P98095 1184 aa17.63■□□□□ 0.41
SGSM1-202ENST00000400359 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
SGSM1-202ENST00000400359 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
SGSM1-202ENST00000400359 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
SGSM1-202ENST00000400359 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
SGSM1-202ENST00000400359 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
SGSM1-202ENST00000400359 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
SGSM1-202ENST00000400359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
SGSM1-202ENST00000400359 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
SGSM1-202ENST00000400359 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
SGSM1-202ENST00000400359 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.4
SGSM1-202ENST00000400359 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
SGSM1-202ENST00000400359 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
SGSM1-202ENST00000400359 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
SGSM1-202ENST00000400359 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
SGSM1-202ENST00000400359 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
SGSM1-202ENST00000400359 ITGAEP38570 1179 aa17.29■□□□□ 0.36
SGSM1-202ENST00000400359 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
SGSM1-202ENST00000400359 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
SGSM1-202ENST00000400359 EEA1Q15075 1411 aa17.24■□□□□ 0.35
SGSM1-202ENST00000400359 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
SGSM1-202ENST00000400359 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
SGSM1-202ENST00000400359 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
SGSM1-202ENST00000400359 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
SGSM1-202ENST00000400359 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
SGSM1-202ENST00000400359 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
SGSM1-202ENST00000400359 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
SGSM1-202ENST00000400359 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
SGSM1-202ENST00000400359 SOGA1O94964 1423 aa17.12■□□□□ 0.33
SGSM1-202ENST00000400359 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
SGSM1-202ENST00000400359 KIF27Q86VH2 1401 aa17.08■□□□□ 0.33
SGSM1-202ENST00000400359 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
SGSM1-202ENST00000400359 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
SGSM1-202ENST00000400359 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
SGSM1-202ENST00000400359 CUX2O14529 1486 aa16.99■□□□□ 0.31
SGSM1-202ENST00000400359 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
SGSM1-202ENST00000400359 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
SGSM1-202ENST00000400359 CFTRP13569 1480 aa16.98■□□□□ 0.31
SGSM1-202ENST00000400359 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
SGSM1-202ENST00000400359 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
SGSM1-202ENST00000400359 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
SGSM1-202ENST00000400359 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
SGSM1-202ENST00000400359 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SGSM1-202ENST00000400359 CLIP1P30622 1438 aa16.9■□□□□ 0.3
SGSM1-202ENST00000400359 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
SGSM1-202ENST00000400359 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.3
SGSM1-202ENST00000400359 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
SGSM1-202ENST00000400359 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
SGSM1-202ENST00000400359 HRCP23327 699 aa16.85■□□□□ 0.29
SGSM1-202ENST00000400359 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
SGSM1-202ENST00000400359 NESP48681 1621 aa16.8■□□□□ 0.28
SGSM1-202ENST00000400359 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
SGSM1-202ENST00000400359 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
SGSM1-202ENST00000400359 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
SGSM1-202ENST00000400359 CUX1P39880 1505 aa16.75■□□□□ 0.27
SGSM1-202ENST00000400359 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
SGSM1-202ENST00000400359 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
SGSM1-202ENST00000400359 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
SGSM1-202ENST00000400359 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
SGSM1-202ENST00000400359 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
SGSM1-202ENST00000400359 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
SGSM1-202ENST00000400359 IGF1RP08069 1367 aa16.63■□□□□ 0.25
SGSM1-202ENST00000400359 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
SGSM1-202ENST00000400359 KIF21BO75037 1637 aa16.62■□□□□ 0.25
SGSM1-202ENST00000400359 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
SGSM1-202ENST00000400359 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
SGSM1-202ENST00000400359 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
SGSM1-202ENST00000400359 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
SGSM1-202ENST00000400359 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms