RNA–Protein interactions for RNA: ENST00000377603.4

POLR3F-201, Transcript of RNA polymerase III subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3F, Length 2,416 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3F-201ENST00000377603 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
POLR3F-201ENST00000377603 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.82
POLR3F-201ENST00000377603 MYT1Q01538 1121 aa20.02■□□□□ 0.8
POLR3F-201ENST00000377603 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
POLR3F-201ENST00000377603 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
POLR3F-201ENST00000377603 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
POLR3F-201ENST00000377603 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
POLR3F-201ENST00000377603 SLC24A1O60721 1099 aa18.84■□□□□ 0.61
POLR3F-201ENST00000377603 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
POLR3F-201ENST00000377603 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
POLR3F-201ENST00000377603 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
POLR3F-201ENST00000377603 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
POLR3F-201ENST00000377603 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
POLR3F-201ENST00000377603 APLP2Q06481 763 aa18.48■□□□□ 0.55
POLR3F-201ENST00000377603 ABCC9O60706 1549 aa18.41■□□□□ 0.54
POLR3F-201ENST00000377603 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
POLR3F-201ENST00000377603 NACADO15069 1562 aa18.08■□□□□ 0.48
POLR3F-201ENST00000377603 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
POLR3F-201ENST00000377603 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
POLR3F-201ENST00000377603 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
POLR3F-201ENST00000377603 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
POLR3F-201ENST00000377603 HRCP23327 699 aa17.92■□□□□ 0.46
POLR3F-201ENST00000377603 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
POLR3F-201ENST00000377603 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.44
POLR3F-201ENST00000377603 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
POLR3F-201ENST00000377603 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
POLR3F-201ENST00000377603 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
POLR3F-201ENST00000377603 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
POLR3F-201ENST00000377603 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
POLR3F-201ENST00000377603 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
POLR3F-201ENST00000377603 WIZO95785 1651 aa17.43■□□□□ 0.38
POLR3F-201ENST00000377603 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
POLR3F-201ENST00000377603 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
POLR3F-201ENST00000377603 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
POLR3F-201ENST00000377603 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
POLR3F-201ENST00000377603 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
POLR3F-201ENST00000377603 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
POLR3F-201ENST00000377603 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
POLR3F-201ENST00000377603 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
POLR3F-201ENST00000377603 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
POLR3F-201ENST00000377603 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
POLR3F-201ENST00000377603 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
POLR3F-201ENST00000377603 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
POLR3F-201ENST00000377603 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
POLR3F-201ENST00000377603 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
POLR3F-201ENST00000377603 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
POLR3F-201ENST00000377603 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
POLR3F-201ENST00000377603 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
POLR3F-201ENST00000377603 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
POLR3F-201ENST00000377603 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
POLR3F-201ENST00000377603 UBE2Q2Q8WVN8 375 aa16.9■□□□□ 0.3
POLR3F-201ENST00000377603 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
POLR3F-201ENST00000377603 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
POLR3F-201ENST00000377603 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
POLR3F-201ENST00000377603 EEA1Q15075 1411 aa16.81■□□□□ 0.28
POLR3F-201ENST00000377603 GTF3C3Q9Y5Q9 886 aa16.78■□□□□ 0.28
POLR3F-201ENST00000377603 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
POLR3F-201ENST00000377603 SOGA1O94964 1423 aa16.74■□□□□ 0.27
POLR3F-201ENST00000377603 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
POLR3F-201ENST00000377603 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
POLR3F-201ENST00000377603 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
POLR3F-201ENST00000377603 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
POLR3F-201ENST00000377603 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
POLR3F-201ENST00000377603 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
POLR3F-201ENST00000377603 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
POLR3F-201ENST00000377603 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
POLR3F-201ENST00000377603 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
POLR3F-201ENST00000377603 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
POLR3F-201ENST00000377603 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
POLR3F-201ENST00000377603 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
POLR3F-201ENST00000377603 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
POLR3F-201ENST00000377603 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
POLR3F-201ENST00000377603 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
POLR3F-201ENST00000377603 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
POLR3F-201ENST00000377603 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
POLR3F-201ENST00000377603 PKNOX2Q96KN3 472 aa16.5■□□□□ 0.23
POLR3F-201ENST00000377603 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
POLR3F-201ENST00000377603 KIF21BO75037 1637 aa16.5■□□□□ 0.23
POLR3F-201ENST00000377603 CFTRP13569 1480 aa16.48■□□□□ 0.23
POLR3F-201ENST00000377603 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
POLR3F-201ENST00000377603 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
POLR3F-201ENST00000377603 ARXQ96QS3 562 aa16.43■□□□□ 0.22
POLR3F-201ENST00000377603 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
POLR3F-201ENST00000377603 CLIP1P30622 1438 aa16.37■□□□□ 0.21
POLR3F-201ENST00000377603 CUX1P39880 1505 aa16.37■□□□□ 0.21
POLR3F-201ENST00000377603 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
POLR3F-201ENST00000377603 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
POLR3F-201ENST00000377603 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
POLR3F-201ENST00000377603 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
POLR3F-201ENST00000377603 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
POLR3F-201ENST00000377603 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
POLR3F-201ENST00000377603 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.19
POLR3F-201ENST00000377603 ERICH6BQ5W0A0 696 aa16.25■□□□□ 0.19
POLR3F-201ENST00000377603 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
POLR3F-201ENST00000377603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
POLR3F-201ENST00000377603 NEFLP07196 543 aa16.22■□□□□ 0.19
POLR3F-201ENST00000377603 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
POLR3F-201ENST00000377603 CUX2O14529 1486 aa16.15■□□□□ 0.18
POLR3F-201ENST00000377603 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
POLR3F-201ENST00000377603 IGF1RP08069 1367 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms