RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
SSXP9-201ENST00000417503 AEBP2Q6ZN18 517 aaPredicted RBP12.61□□□□□ -0.39
SSXP9-201ENST00000417503 PHF23Q9BUL5 403 aaPredicted RBP11.27□□□□□ -0.61
SSXP9-201ENST00000417503 SENP3Q9H4L4 574 aaPredicted RBP10.85□□□□□ -0.67
SSXP9-201ENST00000417503 PLPPR3Q6T4P5 718 aa10.77□□□□□ -0.69
SSXP9-201ENST00000417503 ADRA2BP18089 450 aa9.86□□□□□ -0.83
SSXP9-201ENST00000417503 FOXD1Q16676 465 aa9.86□□□□□ -0.83
SSXP9-201ENST00000417503 PPP6R1Q9UPN7 881 aa9.77□□□□□ -0.85
SSXP9-201ENST00000417503 KCNA4P22459 653 aa9.72□□□□□ -0.85
SSXP9-201ENST00000417503 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
SSXP9-201ENST00000417503 NCBP3Q53F19 620 aaKnown RBP9.51□□□□□ -0.89
SSXP9-201ENST00000417503 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
SSXP9-201ENST00000417503 PPP4R3CPQ6ZMV5 832 aa9.47□□□□□ -0.89
SSXP9-201ENST00000417503 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
SSXP9-201ENST00000417503 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.93
SSXP9-201ENST00000417503 SCAF1Q9H7N4 1312 aaKnown RBP9.25□□□□□ -0.93
SSXP9-201ENST00000417503 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
SSXP9-201ENST00000417503 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
SSXP9-201ENST00000417503 MSH5O43196 834 aa9.09□□□□□ -0.95
SSXP9-201ENST00000417503 DNAJC5BQ9UF47 199 aa8.94□□□□□ -0.98
SSXP9-201ENST00000417503 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
SSXP9-201ENST00000417503 ZBTB22O15209 634 aa8.88□□□□□ -0.99
SSXP9-201ENST00000417503 RNF216Q9NWF9 866 aaPredicted RBP8.87□□□□□ -0.99
SSXP9-201ENST00000417503 MAPK8IP2Q13387 824 aaPredicted RBP8.74□□□□□ -1.01
SSXP9-201ENST00000417503 DMRT2Q9Y5R5 561 aa8.67□□□□□ -1.02
SSXP9-201ENST00000417503 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
SSXP9-201ENST00000417503 ATXN8OSP0DMR3 200 aa8.62□□□□□ -1.03
SSXP9-201ENST00000417503 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
SSXP9-201ENST00000417503 MYCNP04198 464 aaPredicted RBP8.59□□□□□ -1.03
SSXP9-201ENST00000417503 SLC4A2P04920 1241 aa8.51□□□□□ -1.05
SSXP9-201ENST00000417503 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
SSXP9-201ENST00000417503 FKBP8Q14318 412 aa8.43□□□□□ -1.06
SSXP9-201ENST00000417503 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
SSXP9-201ENST00000417503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.42□□□□□ -1.06
SSXP9-201ENST00000417503 HNRNPUL2Q1KMD3 747 aaKnown RBP8.42□□□□□ -1.06
SSXP9-201ENST00000417503 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
SSXP9-201ENST00000417503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSXP9-201ENST00000417503 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
SSXP9-201ENST00000417503 APLP2Q06481 763 aa8.27□□□□□ -1.09
SSXP9-201ENST00000417503 FBXO3Q9UK99 471 aa8.15□□□□□ -1.1
SSXP9-201ENST00000417503 U3KPZ7 1027 aaPredicted RBP8.14□□□□□ -1.11
SSXP9-201ENST00000417503 ATF5Q9Y2D1 282 aaPredicted RBP8.13□□□□□ -1.11
SSXP9-201ENST00000417503 ZNF219Q9P2Y4 722 aaPredicted RBP8.09□□□□□ -1.11
SSXP9-201ENST00000417503 FBLN2P98095 1184 aa8.02□□□□□ -1.13
SSXP9-201ENST00000417503 SPDYE4A6NLX3 237 aa8.01□□□□□ -1.13
SSXP9-201ENST00000417503 VASPP50552 380 aaPredicted RBP7.91□□□□□ -1.14
SSXP9-201ENST00000417503 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.14
SSXP9-201ENST00000417503 PROM2Q8N271 834 aa7.89□□□□□ -1.15
SSXP9-201ENST00000417503 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
SSXP9-201ENST00000417503 TRHP20396 242 aaPredicted RBP7.85□□□□□ -1.15
SSXP9-201ENST00000417503 DCAF8L2P0C7V8 631 aa7.84□□□□□ -1.15
SSXP9-201ENST00000417503 MKRN4PQ13434 485 aaPredicted RBP7.83□□□□□ -1.16
SSXP9-201ENST00000417503 POLA2Q14181 598 aa7.82□□□□□ -1.16
SSXP9-201ENST00000417503 CAPN15O75808 1086 aa7.81□□□□□ -1.16
SSXP9-201ENST00000417503 IFNLR1Q8IU57 520 aaPredicted RBP7.76□□□□□ -1.17
SSXP9-201ENST00000417503 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
SSXP9-201ENST00000417503 C1QBPQ07021 282 aaKnown RBP7.75□□□□□ -1.17
SSXP9-201ENST00000417503 SPINK5Q9NQ38 1064 aaPredicted RBP7.74□□□□□ -1.17
SSXP9-201ENST00000417503 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
SSXP9-201ENST00000417503 KLHL34Q8N239 644 aa7.72□□□□□ -1.17
SSXP9-201ENST00000417503 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.72□□□□□ -1.17
SSXP9-201ENST00000417503 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
SSXP9-201ENST00000417503 BCANQ96GW7 911 aa7.71□□□□□ -1.18
SSXP9-201ENST00000417503 SPOCK2Q92563 424 aa7.7□□□□□ -1.18
SSXP9-201ENST00000417503 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
SSXP9-201ENST00000417503 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
SSXP9-201ENST00000417503 PKD2Q13563 968 aa7.66□□□□□ -1.18
SSXP9-201ENST00000417503 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
SSXP9-201ENST00000417503 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
SSXP9-201ENST00000417503 SPDYE2BA6NHP3 402 aa7.64□□□□□ -1.19
SSXP9-201ENST00000417503 ECM2O94769 699 aaPredicted RBP7.64□□□□□ -1.19
SSXP9-201ENST00000417503 SPDYE6P0CI01 402 aa7.64□□□□□ -1.19
SSXP9-201ENST00000417503 SPDYE2Q495Y8 402 aa7.64□□□□□ -1.19
SSXP9-201ENST00000417503 BBXQ8WY36 941 aaPredicted RBP7.64□□□□□ -1.19
SSXP9-201ENST00000417503 ZBTB47Q9UFB7 747 aaPredicted RBP7.64□□□□□ -1.19
SSXP9-201ENST00000417503 ABCB7O75027 752 aa7.62□□□□□ -1.19
SSXP9-201ENST00000417503 MIER1Q8N108 512 aa7.57□□□□□ -1.2
SSXP9-201ENST00000417503 TRIM41Q8WV44 630 aa7.55□□□□□ -1.2
SSXP9-201ENST00000417503 SSUH2Q9Y2M2 353 aa7.55□□□□□ -1.2
SSXP9-201ENST00000417503 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
SSXP9-201ENST00000417503 PABPN1Q86U42 306 aaKnown RBP eCLIP7.53□□□□□ -1.2
SSXP9-201ENST00000417503 OSCARQ8IYS5 282 aa7.52□□□□□ -1.21
SSXP9-201ENST00000417503 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
SSXP9-201ENST00000417503 CFAP44Q96MT7 982 aa7.52□□□□□ -1.21
SSXP9-201ENST00000417503 DSG3P32926 999 aa7.5□□□□□ -1.21
SSXP9-201ENST00000417503 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
SSXP9-201ENST00000417503 CIZ1Q9ULV3 898 aaPredicted RBP7.49□□□□□ -1.21
SSXP9-201ENST00000417503 RGL2O15211 777 aa7.46□□□□□ -1.22
SSXP9-201ENST00000417503 CHGAP10645 457 aaKnown RBP7.44□□□□□ -1.22
SSXP9-201ENST00000417503 GSE1Q14687 1217 aa7.43□□□□□ -1.22
SSXP9-201ENST00000417503 NPM1P06748 294 aaKnown RBP eCLIP7.42□□□□□ -1.22
SSXP9-201ENST00000417503 NBR1Q14596 966 aa7.4□□□□□ -1.22
SSXP9-201ENST00000417503 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
SSXP9-201ENST00000417503 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
SSXP9-201ENST00000417503 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
SSXP9-201ENST00000417503 PRKCSHP14314 528 aaPredicted RBP7.34□□□□□ -1.23
SSXP9-201ENST00000417503 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
SSXP9-201ENST00000417503 RYDENQ9NUL5 291 aaKnown RBP7.34□□□□□ -1.23
SSXP9-201ENST00000417503 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
SSXP9-201ENST00000417503 SPDYE1Q8NFV5 336 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms