Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.12□□□□□ -1.91
PKHD1P08F94 AC119751.5-201ENST00000514077 770 ntBASIC3.12□□□□□ -1.91
PKHD1P08F94 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.12□□□□□ -1.91
PKHD1P08F94 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.12□□□□□ -1.91
PKHD1P08F94 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.12□□□□□ -1.91
PKHD1P08F94 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC073073.1-201ENST00000493920 463 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 BNIP3P19-201ENST00000605397 577 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 MIR6853-201ENST00000619642 74 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 CDRT1-208ENST00000630868 794 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC009951.1-201ENST00000623674 2614 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AL358176.3-201ENST00000420757 454 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC015795.1-201ENST00000513669 327 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 MRPL49P2-201ENST00000521066 465 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC3.11□□□□□ -1.91
PKHD1P08F94 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 MIR372-201ENST00000362225 67 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.11□□□□□ -1.91
PKHD1P08F94 RPL36AP41-201ENST00000493820 306 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 GAPDHP62-201ENST00000515313 990 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
PKHD1P08F94 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.11□□□□□ -1.91
PKHD1P08F94 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 LPP-208ENST00000448637 5835 ntTSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.11□□□□□ -1.91
PKHD1P08F94 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PKHD1P08F94 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC093591.2-201ENST00000565254 3843 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
PKHD1P08F94 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 RNF10P1-201ENST00000418589 369 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AL500522.2-201ENST00000448562 343 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PKHD1P08F94 RN7SKP83-201ENST00000516512 178 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.1□□□□□ -1.91
PKHD1P08F94 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC017100.2-201ENST00000584628 355 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC017104.4-201ENST00000636283 1592 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms