RNA–Protein interactions for RNA: ENST00000565993.1

AC055855.2-201, humanhuman

TSL 2 BASIC

Gene AC055855.2, Length 500 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.2-201ENST00000565993 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
AC055855.2-201ENST00000565993 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
AC055855.2-201ENST00000565993 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
AC055855.2-201ENST00000565993 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
AC055855.2-201ENST00000565993 FOXD1Q16676 465 aa22.99■■□□□ 1.27
AC055855.2-201ENST00000565993 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
AC055855.2-201ENST00000565993 MSH5O43196 834 aa21.68■■□□□ 1.06
AC055855.2-201ENST00000565993 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
AC055855.2-201ENST00000565993 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
AC055855.2-201ENST00000565993 PPP6R1Q9UPN7 881 aa21.33■■□□□ 1.01
AC055855.2-201ENST00000565993 ADRA2BP18089 450 aa21.26■□□□□ 0.99
AC055855.2-201ENST00000565993 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
AC055855.2-201ENST00000565993 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
AC055855.2-201ENST00000565993 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
AC055855.2-201ENST00000565993 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
AC055855.2-201ENST00000565993 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
AC055855.2-201ENST00000565993 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
AC055855.2-201ENST00000565993 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
AC055855.2-201ENST00000565993 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
AC055855.2-201ENST00000565993 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
AC055855.2-201ENST00000565993 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
AC055855.2-201ENST00000565993 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
AC055855.2-201ENST00000565993 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
AC055855.2-201ENST00000565993 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
AC055855.2-201ENST00000565993 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
AC055855.2-201ENST00000565993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
AC055855.2-201ENST00000565993 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
AC055855.2-201ENST00000565993 KCNA4P22459 653 aa17.46■□□□□ 0.39
AC055855.2-201ENST00000565993 CAPN15O75808 1086 aa17.25■□□□□ 0.35
AC055855.2-201ENST00000565993 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
AC055855.2-201ENST00000565993 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
AC055855.2-201ENST00000565993 DSG3P32926 999 aa17.19■□□□□ 0.34
AC055855.2-201ENST00000565993 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC055855.2-201ENST00000565993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
AC055855.2-201ENST00000565993 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
AC055855.2-201ENST00000565993 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
AC055855.2-201ENST00000565993 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
AC055855.2-201ENST00000565993 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
AC055855.2-201ENST00000565993 ABCB7O75027 752 aa16.79■□□□□ 0.28
AC055855.2-201ENST00000565993 POTEHQ6S545 545 aa16.71■□□□□ 0.27
AC055855.2-201ENST00000565993 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
AC055855.2-201ENST00000565993 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
AC055855.2-201ENST00000565993 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
AC055855.2-201ENST00000565993 POLA2Q14181 598 aa16.43■□□□□ 0.22
AC055855.2-201ENST00000565993 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
AC055855.2-201ENST00000565993 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
AC055855.2-201ENST00000565993 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
AC055855.2-201ENST00000565993 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
AC055855.2-201ENST00000565993 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
AC055855.2-201ENST00000565993 ZBTB22O15209 634 aa16.03■□□□□ 0.16
AC055855.2-201ENST00000565993 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
AC055855.2-201ENST00000565993 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
AC055855.2-201ENST00000565993 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
AC055855.2-201ENST00000565993 FBLN2P98095 1184 aa15.7■□□□□ 0.1
AC055855.2-201ENST00000565993 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
AC055855.2-201ENST00000565993 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
AC055855.2-201ENST00000565993 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
AC055855.2-201ENST00000565993 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
AC055855.2-201ENST00000565993 HAX1O00165 279 aa15.44■□□□□ 0.06
AC055855.2-201ENST00000565993 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
AC055855.2-201ENST00000565993 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
AC055855.2-201ENST00000565993 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
AC055855.2-201ENST00000565993 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
AC055855.2-201ENST00000565993 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
AC055855.2-201ENST00000565993 EVX2Q03828 476 aa15.17■□□□□ 0.02
AC055855.2-201ENST00000565993 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
AC055855.2-201ENST00000565993 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC055855.2-201ENST00000565993 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
AC055855.2-201ENST00000565993 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
AC055855.2-201ENST00000565993 CHADLQ6NUI6 762 aa15.02■□□□□ -0
AC055855.2-201ENST00000565993 GABBR2O75899 941 aa14.89□□□□□ -0.03
AC055855.2-201ENST00000565993 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
AC055855.2-201ENST00000565993 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
AC055855.2-201ENST00000565993 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
AC055855.2-201ENST00000565993 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
AC055855.2-201ENST00000565993 CLCN6P51797 869 aa14.75□□□□□ -0.05
AC055855.2-201ENST00000565993 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
AC055855.2-201ENST00000565993 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
AC055855.2-201ENST00000565993 LHX8Q68G74 356 aa14.62□□□□□ -0.07
AC055855.2-201ENST00000565993 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
AC055855.2-201ENST00000565993 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
AC055855.2-201ENST00000565993 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
AC055855.2-201ENST00000565993 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
AC055855.2-201ENST00000565993 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
AC055855.2-201ENST00000565993 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
AC055855.2-201ENST00000565993 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
AC055855.2-201ENST00000565993 PROM2Q8N271 834 aa14.37□□□□□ -0.11
AC055855.2-201ENST00000565993 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
AC055855.2-201ENST00000565993 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
AC055855.2-201ENST00000565993 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
AC055855.2-201ENST00000565993 MS4A3Q96HJ5 214 aa14.12□□□□□ -0.15
AC055855.2-201ENST00000565993 ASTLQ6HA08 431 aaPredicted RBP14.11□□□□□ -0.15
AC055855.2-201ENST00000565993 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
AC055855.2-201ENST00000565993 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
AC055855.2-201ENST00000565993 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
AC055855.2-201ENST00000565993 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms