RNA–Protein interactions for RNA: ENST00000457749.6

ZNF28-204, Transcript of zinc finger protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF28, Length 4,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-204ENST00000457749 NISCHQ9Y2I1 1504 aa10.6□□□□□ -0.71
ZNF28-204ENST00000457749 DCAF8L2P0C7V8 631 aa9.62□□□□□ -0.87
ZNF28-204ENST00000457749 ABCC9O60706 1549 aa9.54□□□□□ -0.88
ZNF28-204ENST00000457749 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
ZNF28-204ENST00000457749 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
ZNF28-204ENST00000457749 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
ZNF28-204ENST00000457749 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
ZNF28-204ENST00000457749 DNAJC5BQ9UF47 199 aa8.81□□□□□ -1
ZNF28-204ENST00000457749 NACADO15069 1562 aa8.77□□□□□ -1.01
ZNF28-204ENST00000457749 ZCCHC6Q5VYS8 1495 aaKnown RBP8.76□□□□□ -1.01
ZNF28-204ENST00000457749 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
ZNF28-204ENST00000457749 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
ZNF28-204ENST00000457749 DCAF1Q9Y4B6 1507 aa8.52□□□□□ -1.05
ZNF28-204ENST00000457749 MYO15BQ96JP2 1530 aa8.52□□□□□ -1.05
ZNF28-204ENST00000457749 UNC13AQ9UPW8 1703 aa8.52□□□□□ -1.05
ZNF28-204ENST00000457749 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
ZNF28-204ENST00000457749 CECR2Q9BXF3 1484 aa8.47□□□□□ -1.05
ZNF28-204ENST00000457749 EIF4G1Q04637 1599 aaKnown RBP8.4□□□□□ -1.07
ZNF28-204ENST00000457749 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.07
ZNF28-204ENST00000457749 MROH2BQ7Z745 1585 aa8.26□□□□□ -1.09
ZNF28-204ENST00000457749 BAZ1BQ9UIG0 1483 aaKnown RBP8.25□□□□□ -1.09
ZNF28-204ENST00000457749 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
ZNF28-204ENST00000457749 ATAD2BQ9ULI0 1458 aa8.24□□□□□ -1.09
ZNF28-204ENST00000457749 BAZ1AQ9NRL2 1556 aaPredicted RBP8.21□□□□□ -1.1
ZNF28-204ENST00000457749 NESP48681 1621 aa8.19□□□□□ -1.1
ZNF28-204ENST00000457749 SMARCA4P51532 1647 aa8.19□□□□□ -1.1
ZNF28-204ENST00000457749 RSF1Q96T23 1441 aaPredicted RBP8.17□□□□□ -1.1
ZNF28-204ENST00000457749 NCAPD3P42695 1498 aa8.15□□□□□ -1.1
ZNF28-204ENST00000457749 SMARCA2P51531 1590 aa8.15□□□□□ -1.1
ZNF28-204ENST00000457749 WIZO95785 1651 aa8.15□□□□□ -1.1
ZNF28-204ENST00000457749 FBLN2P98095 1184 aa8.08□□□□□ -1.12
ZNF28-204ENST00000457749 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
ZNF28-204ENST00000457749 EHMT2Q96KQ7 1210 aa8.03□□□□□ -1.12
ZNF28-204ENST00000457749 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
ZNF28-204ENST00000457749 HMGXB3Q12766 1538 aa8.02□□□□□ -1.13
ZNF28-204ENST00000457749 CCDC88BA6NC98 1476 aa8.01□□□□□ -1.13
ZNF28-204ENST00000457749 FANCD2Q9BXW9 1451 aa7.98□□□□□ -1.13
ZNF28-204ENST00000457749 TRIM41Q8WV44 630 aa7.97□□□□□ -1.13
ZNF28-204ENST00000457749 TOP2AP11388 1531 aaKnown RBP7.96□□□□□ -1.14
ZNF28-204ENST00000457749 TTBK1Q5TCY1 1321 aaPredicted RBP7.96□□□□□ -1.14
ZNF28-204ENST00000457749 CEP164Q9UPV0 1460 aa7.95□□□□□ -1.14
ZNF28-204ENST00000457749 FAM9AQ8IZU1 332 aaPredicted RBP7.93□□□□□ -1.14
ZNF28-204ENST00000457749 PEG3Q9GZU2 1588 aa7.93□□□□□ -1.14
ZNF28-204ENST00000457749 RANGAP1P46060 587 aaPredicted RBP7.91□□□□□ -1.14
ZNF28-204ENST00000457749 LAMC3Q9Y6N6 1575 aa7.9□□□□□ -1.14
ZNF28-204ENST00000457749 TDRD9Q8NDG6 1382 aaKnown RBP7.9□□□□□ -1.14
ZNF28-204ENST00000457749 CFTRP13569 1480 aa7.9□□□□□ -1.15
ZNF28-204ENST00000457749 KIF21AQ7Z4S6 1674 aa7.89□□□□□ -1.15
ZNF28-204ENST00000457749 MRC2Q9UBG0 1479 aa7.88□□□□□ -1.15
ZNF28-204ENST00000457749 DNAJC5Q9H3Z4 198 aa7.87□□□□□ -1.15
ZNF28-204ENST00000457749 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
ZNF28-204ENST00000457749 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
ZNF28-204ENST00000457749 AQRO60306 1485 aaKnown RBP eCLIP7.84□□□□□ -1.15
ZNF28-204ENST00000457749 CUX2O14529 1486 aa7.84□□□□□ -1.15
ZNF28-204ENST00000457749 RAD54L2Q9Y4B4 1467 aa7.84□□□□□ -1.15
ZNF28-204ENST00000457749 URB2Q14146 1524 aaKnown RBP7.84□□□□□ -1.16
ZNF28-204ENST00000457749 SOGA1O94964 1423 aa7.82□□□□□ -1.16
ZNF28-204ENST00000457749 CYB5RLQ6IPT4 315 aa7.82□□□□□ -1.16
ZNF28-204ENST00000457749 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
ZNF28-204ENST00000457749 ABCC8Q09428 1581 aa7.8□□□□□ -1.16
ZNF28-204ENST00000457749 TOPBP1Q92547 1522 aa7.79□□□□□ -1.16
ZNF28-204ENST00000457749 TRHP20396 242 aaPredicted RBP7.78□□□□□ -1.16
ZNF28-204ENST00000457749 THOC2Q8NI27 1593 aaKnown RBP7.77□□□□□ -1.16
ZNF28-204ENST00000457749 WRNQ14191 1432 aaPredicted RBP eCLIP7.77□□□□□ -1.17
ZNF28-204ENST00000457749 FGD5Q6ZNL6 1462 aa7.76□□□□□ -1.17
ZNF28-204ENST00000457749 POLA1P09884 1462 aaPredicted RBP7.75□□□□□ -1.17
ZNF28-204ENST00000457749 CHIC1Q5VXU3 224 aa7.73□□□□□ -1.17
ZNF28-204ENST00000457749 WDR62O43379 1518 aa7.73□□□□□ -1.17
ZNF28-204ENST00000457749 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
ZNF28-204ENST00000457749 IFT140Q96RY7 1462 aa7.72□□□□□ -1.17
ZNF28-204ENST00000457749 CUX1P39880 1505 aa7.71□□□□□ -1.17
ZNF28-204ENST00000457749 P3H3Q8IVL6 736 aa7.71□□□□□ -1.18
ZNF28-204ENST00000457749 ATP1B4Q9UN42 357 aaPredicted RBP7.7□□□□□ -1.18
ZNF28-204ENST00000457749 DNMBPQ6XZF7 1577 aa7.69□□□□□ -1.18
ZNF28-204ENST00000457749 UBTFP17480 764 aaKnown RBP7.68□□□□□ -1.18
ZNF28-204ENST00000457749 GAPVD1Q14C86 1478 aa7.67□□□□□ -1.18
ZNF28-204ENST00000457749 SNAPC4Q5SXM2 1469 aa7.67□□□□□ -1.18
ZNF28-204ENST00000457749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.65□□□□□ -1.18
ZNF28-204ENST00000457749 HNRNPUL2Q1KMD3 747 aaKnown RBP7.65□□□□□ -1.18
ZNF28-204ENST00000457749 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
ZNF28-204ENST00000457749 EIF4G3O43432 1585 aaKnown RBP7.63□□□□□ -1.19
ZNF28-204ENST00000457749 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
ZNF28-204ENST00000457749 JPH4Q96JJ6 628 aa7.62□□□□□ -1.19
ZNF28-204ENST00000457749 KIF27Q86VH2 1401 aa7.61□□□□□ -1.19
ZNF28-204ENST00000457749 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
ZNF28-204ENST00000457749 NPM1P06748 294 aaKnown RBP eCLIP7.61□□□□□ -1.19
ZNF28-204ENST00000457749 RUSC2Q8N2Y8 1516 aa7.61□□□□□ -1.19
ZNF28-204ENST00000457749 CARMIL1Q5VZK9 1371 aa7.59□□□□□ -1.19
ZNF28-204ENST00000457749 CSRNP3Q8WYN3 585 aa7.59□□□□□ -1.2
ZNF28-204ENST00000457749 IGF1RP08069 1367 aa7.57□□□□□ -1.2
ZNF28-204ENST00000457749 TARBP1Q13395 1621 aaKnown RBP7.57□□□□□ -1.2
ZNF28-204ENST00000457749 PRDM2Q13029 1718 aa7.57□□□□□ -1.2
ZNF28-204ENST00000457749 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
ZNF28-204ENST00000457749 KCNH8Q96L42 1107 aa7.56□□□□□ -1.2
ZNF28-204ENST00000457749 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
ZNF28-204ENST00000457749 TOP2BQ02880 1626 aa7.55□□□□□ -1.2
ZNF28-204ENST00000457749 FHAD1B1AJZ9 1412 aa7.53□□□□□ -1.2
ZNF28-204ENST00000457749 MAGI1Q96QZ7 1491 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-204ENST00000457749 PRG4Q92954 1404 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-204ENST00000457749 ARHGEF11O15085 1522 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms