RNA–Protein interactions for RNA: ENST00000543602.5

GABARAPL1-212, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5 BASIC

Gene GABARAPL1, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-212ENST00000543602 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
GABARAPL1-212ENST00000543602 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
GABARAPL1-212ENST00000543602 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
GABARAPL1-212ENST00000543602 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
GABARAPL1-212ENST00000543602 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
GABARAPL1-212ENST00000543602 FOXD1Q16676 465 aa14.11□□□□□ -0.15
GABARAPL1-212ENST00000543602 ADRA2BP18089 450 aa13.82□□□□□ -0.2
GABARAPL1-212ENST00000543602 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
GABARAPL1-212ENST00000543602 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
GABARAPL1-212ENST00000543602 KCNA4P22459 653 aa13.04□□□□□ -0.32
GABARAPL1-212ENST00000543602 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
GABARAPL1-212ENST00000543602 MSH5O43196 834 aa12.92□□□□□ -0.34
GABARAPL1-212ENST00000543602 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
GABARAPL1-212ENST00000543602 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
GABARAPL1-212ENST00000543602 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
GABARAPL1-212ENST00000543602 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
GABARAPL1-212ENST00000543602 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
GABARAPL1-212ENST00000543602 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
GABARAPL1-212ENST00000543602 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
GABARAPL1-212ENST00000543602 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
GABARAPL1-212ENST00000543602 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
GABARAPL1-212ENST00000543602 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
GABARAPL1-212ENST00000543602 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
GABARAPL1-212ENST00000543602 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
GABARAPL1-212ENST00000543602 ZBTB22O15209 634 aa11.99□□□□□ -0.49
GABARAPL1-212ENST00000543602 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
GABARAPL1-212ENST00000543602 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
GABARAPL1-212ENST00000543602 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
GABARAPL1-212ENST00000543602 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
GABARAPL1-212ENST00000543602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
GABARAPL1-212ENST00000543602 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
GABARAPL1-212ENST00000543602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
GABARAPL1-212ENST00000543602 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
GABARAPL1-212ENST00000543602 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
GABARAPL1-212ENST00000543602 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
GABARAPL1-212ENST00000543602 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
GABARAPL1-212ENST00000543602 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
GABARAPL1-212ENST00000543602 APLP2Q06481 763 aa11.21□□□□□ -0.61
GABARAPL1-212ENST00000543602 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
GABARAPL1-212ENST00000543602 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
GABARAPL1-212ENST00000543602 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
GABARAPL1-212ENST00000543602 FKBP8Q14318 412 aa11.01□□□□□ -0.65
GABARAPL1-212ENST00000543602 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
GABARAPL1-212ENST00000543602 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
GABARAPL1-212ENST00000543602 TRHP20396 242 aaPredicted RBP10.92□□□□□ -0.66
GABARAPL1-212ENST00000543602 CAPN15O75808 1086 aa10.91□□□□□ -0.66
GABARAPL1-212ENST00000543602 POLA2Q14181 598 aa10.84□□□□□ -0.67
GABARAPL1-212ENST00000543602 FBLN2P98095 1184 aa10.8□□□□□ -0.68
GABARAPL1-212ENST00000543602 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
GABARAPL1-212ENST00000543602 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
GABARAPL1-212ENST00000543602 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
GABARAPL1-212ENST00000543602 ABCB7O75027 752 aa10.7□□□□□ -0.7
GABARAPL1-212ENST00000543602 DSG3P32926 999 aa10.65□□□□□ -0.7
GABARAPL1-212ENST00000543602 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
GABARAPL1-212ENST00000543602 PROM2Q8N271 834 aa10.6□□□□□ -0.71
GABARAPL1-212ENST00000543602 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
GABARAPL1-212ENST00000543602 RTN4Q9NQC3 1192 aaKnown RBP10.57□□□□□ -0.72
GABARAPL1-212ENST00000543602 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
GABARAPL1-212ENST00000543602 SPDYE2BA6NHP3 402 aa10.44□□□□□ -0.74
GABARAPL1-212ENST00000543602 SPDYE6P0CI01 402 aa10.44□□□□□ -0.74
GABARAPL1-212ENST00000543602 SPDYE2Q495Y8 402 aa10.44□□□□□ -0.74
GABARAPL1-212ENST00000543602 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
GABARAPL1-212ENST00000543602 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
GABARAPL1-212ENST00000543602 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
GABARAPL1-212ENST00000543602 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
GABARAPL1-212ENST00000543602 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
GABARAPL1-212ENST00000543602 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
GABARAPL1-212ENST00000543602 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
GABARAPL1-212ENST00000543602 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
GABARAPL1-212ENST00000543602 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
GABARAPL1-212ENST00000543602 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
GABARAPL1-212ENST00000543602 MIER1Q8N108 512 aa10.13□□□□□ -0.79
GABARAPL1-212ENST00000543602 SPOCK2Q92563 424 aa10.12□□□□□ -0.79
GABARAPL1-212ENST00000543602 AKT1S1Q96B36 256 aa10.11□□□□□ -0.79
GABARAPL1-212ENST00000543602 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
GABARAPL1-212ENST00000543602 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
GABARAPL1-212ENST00000543602 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
GABARAPL1-212ENST00000543602 PKD2Q13563 968 aa10.05□□□□□ -0.8
GABARAPL1-212ENST00000543602 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
GABARAPL1-212ENST00000543602 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
GABARAPL1-212ENST00000543602 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
GABARAPL1-212ENST00000543602 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
GABARAPL1-212ENST00000543602 ABCC9O60706 1549 aa9.96□□□□□ -0.82
GABARAPL1-212ENST00000543602 ECM2O94769 699 aaPredicted RBP9.94□□□□□ -0.82
GABARAPL1-212ENST00000543602 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
GABARAPL1-212ENST00000543602 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
GABARAPL1-212ENST00000543602 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
GABARAPL1-212ENST00000543602 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
GABARAPL1-212ENST00000543602 CREBZFQ9NS37 354 aa9.87□□□□□ -0.83
GABARAPL1-212ENST00000543602 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
GABARAPL1-212ENST00000543602 GSE1Q14687 1217 aa9.84□□□□□ -0.83
GABARAPL1-212ENST00000543602 NUBP1P53384 320 aa9.83□□□□□ -0.84
GABARAPL1-212ENST00000543602 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
GABARAPL1-212ENST00000543602 RGL2O15211 777 aa9.81□□□□□ -0.84
GABARAPL1-212ENST00000543602 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
GABARAPL1-212ENST00000543602 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
GABARAPL1-212ENST00000543602 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
GABARAPL1-212ENST00000543602 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
GABARAPL1-212ENST00000543602 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
GABARAPL1-212ENST00000543602 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms