RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
DSC3-201ENST00000360428 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
DSC3-201ENST00000360428 NISCHQ9Y2I1 1504 aa9.63□□□□□ -0.87
DSC3-201ENST00000360428 MYT1Q01538 1121 aa9.26□□□□□ -0.93
DSC3-201ENST00000360428 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
DSC3-201ENST00000360428 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
DSC3-201ENST00000360428 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
DSC3-201ENST00000360428 APLP2Q06481 763 aa9.16□□□□□ -0.94
DSC3-201ENST00000360428 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
DSC3-201ENST00000360428 FAM9AQ8IZU1 332 aaPredicted RBP9.08□□□□□ -0.96
DSC3-201ENST00000360428 ZEB1P37275 1124 aaPredicted RBP9.06□□□□□ -0.96
DSC3-201ENST00000360428 EHMT2Q96KQ7 1210 aa8.96□□□□□ -0.98
DSC3-201ENST00000360428 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
DSC3-201ENST00000360428 NEFLP07196 543 aa8.93□□□□□ -0.98
DSC3-201ENST00000360428 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
DSC3-201ENST00000360428 YTHDC1Q96MU7 727 aaKnown RBP8.85□□□□□ -0.99
DSC3-201ENST00000360428 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
DSC3-201ENST00000360428 TTBK1Q5TCY1 1321 aaPredicted RBP8.72□□□□□ -1.01
DSC3-201ENST00000360428 TRIM41Q8WV44 630 aa8.66□□□□□ -1.02
DSC3-201ENST00000360428 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
DSC3-201ENST00000360428 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
DSC3-201ENST00000360428 RANGAP1P46060 587 aaPredicted RBP8.57□□□□□ -1.04
DSC3-201ENST00000360428 RTL5Q5HYW3 569 aaPredicted RBP8.56□□□□□ -1.04
DSC3-201ENST00000360428 TRIM26Q12899 539 aaPredicted RBP8.56□□□□□ -1.04
DSC3-201ENST00000360428 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
DSC3-201ENST00000360428 HRCP23327 699 aa8.47□□□□□ -1.05
DSC3-201ENST00000360428 CLSPNQ9HAW4 1339 aa8.42□□□□□ -1.06
DSC3-201ENST00000360428 POLR3GLQ9BT43 218 aa8.4□□□□□ -1.06
DSC3-201ENST00000360428 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
DSC3-201ENST00000360428 DIEXFQ68CQ4 756 aaKnown RBP8.32□□□□□ -1.08
DSC3-201ENST00000360428 CDK11AQ9UQ88 783 aaPredicted RBP8.32□□□□□ -1.08
DSC3-201ENST00000360428 PPARGC1BQ86YN6 1023 aaKnown RBP8.31□□□□□ -1.08
DSC3-201ENST00000360428 ITGAEP38570 1179 aa8.3□□□□□ -1.08
DSC3-201ENST00000360428 ZBTB47Q9UFB7 747 aaPredicted RBP8.3□□□□□ -1.08
DSC3-201ENST00000360428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
DSC3-201ENST00000360428 HNRNPUL2Q1KMD3 747 aaKnown RBP8.29□□□□□ -1.08
DSC3-201ENST00000360428 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
DSC3-201ENST00000360428 GLIPR1L2Q4G1C9 344 aa8.23□□□□□ -1.09
DSC3-201ENST00000360428 ANP32CO43423 234 aa8.23□□□□□ -1.09
DSC3-201ENST00000360428 CCDC180Q9P1Z9 1646 aa8.22□□□□□ -1.09
DSC3-201ENST00000360428 CNGB1Q14028 1251 aaPredicted RBP8.21□□□□□ -1.09
DSC3-201ENST00000360428 ZCCHC6Q5VYS8 1495 aaKnown RBP8.21□□□□□ -1.1
DSC3-201ENST00000360428 ANP32AP39687 249 aaKnown RBP8.21□□□□□ -1.1
DSC3-201ENST00000360428 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
DSC3-201ENST00000360428 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
DSC3-201ENST00000360428 CANXP27824 592 aaKnown RBP8.16□□□□□ -1.1
DSC3-201ENST00000360428 NEFMP07197 916 aa8.14□□□□□ -1.11
DSC3-201ENST00000360428 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
DSC3-201ENST00000360428 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
DSC3-201ENST00000360428 BCANQ96GW7 911 aa8.13□□□□□ -1.11
DSC3-201ENST00000360428 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
DSC3-201ENST00000360428 CHIC1Q5VXU3 224 aa8.12□□□□□ -1.11
DSC3-201ENST00000360428 NEUROD1Q13562 356 aa8.09□□□□□ -1.11
DSC3-201ENST00000360428 EIF5BO60841 1220 aaKnown RBP8.08□□□□□ -1.12
DSC3-201ENST00000360428 ACIN1Q9UKV3 1341 aaKnown RBP8.07□□□□□ -1.12
DSC3-201ENST00000360428 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
DSC3-201ENST00000360428 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
DSC3-201ENST00000360428 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
DSC3-201ENST00000360428 SLC24A1O60721 1099 aa8.01□□□□□ -1.13
DSC3-201ENST00000360428 ZNF326Q5BKZ1 582 aaKnown RBP8□□□□□ -1.13
DSC3-201ENST00000360428 MYO15BQ96JP2 1530 aa7.99□□□□□ -1.13
DSC3-201ENST00000360428 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.97□□□□□ -1.13
DSC3-201ENST00000360428 ANP32EQ9BTT0 268 aa7.96□□□□□ -1.13
DSC3-201ENST00000360428 FKBP8Q14318 412 aa7.95□□□□□ -1.14
DSC3-201ENST00000360428 BCL11AQ9H165 835 aa7.95□□□□□ -1.14
DSC3-201ENST00000360428 DCAF1Q9Y4B6 1507 aa7.94□□□□□ -1.14
DSC3-201ENST00000360428 TNNT2P45379 298 aaPredicted RBP7.94□□□□□ -1.14
DSC3-201ENST00000360428 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
DSC3-201ENST00000360428 DDRGK1Q96HY6 314 aa7.92□□□□□ -1.14
DSC3-201ENST00000360428 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
DSC3-201ENST00000360428 BECN1Q14457 450 aa7.89□□□□□ -1.15
DSC3-201ENST00000360428 TONSLQ96HA7 1378 aa7.88□□□□□ -1.15
DSC3-201ENST00000360428 TRIM44Q96DX7 344 aaPredicted RBP7.88□□□□□ -1.15
DSC3-201ENST00000360428 NCLP19338 710 aaKnown RBP7.88□□□□□ -1.15
DSC3-201ENST00000360428 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
DSC3-201ENST00000360428 NBR1Q14596 966 aa7.87□□□□□ -1.15
DSC3-201ENST00000360428 GOLGA6L22H0YM25 854 aa7.86□□□□□ -1.15
DSC3-201ENST00000360428 MYH16Q9H6N6 1097 aa7.85□□□□□ -1.15
DSC3-201ENST00000360428 WDR43Q15061 677 aaKnown RBP eCLIP7.83□□□□□ -1.16
DSC3-201ENST00000360428 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
DSC3-201ENST00000360428 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
DSC3-201ENST00000360428 ABCC9O60706 1549 aa7.81□□□□□ -1.16
DSC3-201ENST00000360428 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
DSC3-201ENST00000360428 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
DSC3-201ENST00000360428 PPM1GO15355 546 aaPredicted RBP7.79□□□□□ -1.16
DSC3-201ENST00000360428 ZRSR1Q15695 479 aaKnown RBP7.78□□□□□ -1.16
DSC3-201ENST00000360428 ARXQ96QS3 562 aa7.78□□□□□ -1.16
DSC3-201ENST00000360428 PTMAP06454 111 aaKnown RBP7.78□□□□□ -1.16
DSC3-201ENST00000360428 CSRNP3Q8WYN3 585 aa7.78□□□□□ -1.16
DSC3-201ENST00000360428 STAG3Q9UJ98 1225 aa7.78□□□□□ -1.16
DSC3-201ENST00000360428 DDX10Q13206 875 aaKnown RBP7.77□□□□□ -1.17
DSC3-201ENST00000360428 CASC1Q6TDU7 716 aa7.77□□□□□ -1.17
DSC3-201ENST00000360428 GOLGA6L6A8MZA4 724 aa7.76□□□□□ -1.17
DSC3-201ENST00000360428 ZNF777Q9ULD5 760 aaPredicted RBP7.76□□□□□ -1.17
DSC3-201ENST00000360428 FBLN2P98095 1184 aa7.75□□□□□ -1.17
DSC3-201ENST00000360428 DNTTIP2Q5QJE6 756 aaKnown RBP7.75□□□□□ -1.17
DSC3-201ENST00000360428 MRS2Q9HD23 443 aa7.75□□□□□ -1.17
DSC3-201ENST00000360428 EIF4G1Q04637 1599 aaKnown RBP7.73□□□□□ -1.17
DSC3-201ENST00000360428 CHGAP10645 457 aaKnown RBP7.73□□□□□ -1.17
DSC3-201ENST00000360428 NAP1L5Q96NT1 182 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms