RNA–Protein interactions for RNA: ENST00000636570.1

CACNA1D-211, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1D, Length 6,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-211ENST00000636570 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
CACNA1D-211ENST00000636570 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
CACNA1D-211ENST00000636570 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.36
CACNA1D-211ENST00000636570 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
CACNA1D-211ENST00000636570 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
CACNA1D-211ENST00000636570 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
CACNA1D-211ENST00000636570 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
CACNA1D-211ENST00000636570 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
CACNA1D-211ENST00000636570 CCDC180Q9P1Z9 1646 aa12.14□□□□□ -0.47
CACNA1D-211ENST00000636570 APLP2Q06481 763 aa12.13□□□□□ -0.47
CACNA1D-211ENST00000636570 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-211ENST00000636570 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-211ENST00000636570 ABCC9O60706 1549 aa12.06□□□□□ -0.48
CACNA1D-211ENST00000636570 CHIC1Q5VXU3 224 aa12□□□□□ -0.49
CACNA1D-211ENST00000636570 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
CACNA1D-211ENST00000636570 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
CACNA1D-211ENST00000636570 MYT1Q01538 1121 aa11.75□□□□□ -0.53
CACNA1D-211ENST00000636570 ZCCHC6Q5VYS8 1495 aaKnown RBP11.75□□□□□ -0.53
CACNA1D-211ENST00000636570 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
CACNA1D-211ENST00000636570 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-211ENST00000636570 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
CACNA1D-211ENST00000636570 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
CACNA1D-211ENST00000636570 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
CACNA1D-211ENST00000636570 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
CACNA1D-211ENST00000636570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
CACNA1D-211ENST00000636570 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
CACNA1D-211ENST00000636570 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
CACNA1D-211ENST00000636570 NACADO15069 1562 aa11.58□□□□□ -0.56
CACNA1D-211ENST00000636570 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
CACNA1D-211ENST00000636570 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
CACNA1D-211ENST00000636570 YTHDC1Q96MU7 727 aaKnown RBP11.51□□□□□ -0.57
CACNA1D-211ENST00000636570 SLC24A1O60721 1099 aa11.46□□□□□ -0.58
CACNA1D-211ENST00000636570 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.58
CACNA1D-211ENST00000636570 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
CACNA1D-211ENST00000636570 NEFLP07196 543 aa11.44□□□□□ -0.58
CACNA1D-211ENST00000636570 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
CACNA1D-211ENST00000636570 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
CACNA1D-211ENST00000636570 ITGAEP38570 1179 aa11.38□□□□□ -0.59
CACNA1D-211ENST00000636570 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
CACNA1D-211ENST00000636570 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
CACNA1D-211ENST00000636570 BCANQ96GW7 911 aa11.31□□□□□ -0.6
CACNA1D-211ENST00000636570 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
CACNA1D-211ENST00000636570 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.6
CACNA1D-211ENST00000636570 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
CACNA1D-211ENST00000636570 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
CACNA1D-211ENST00000636570 A0A0G2JS52 829 aa11.12□□□□□ -0.63
CACNA1D-211ENST00000636570 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-211ENST00000636570 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
CACNA1D-211ENST00000636570 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
CACNA1D-211ENST00000636570 FBLN2P98095 1184 aa11.05□□□□□ -0.64
CACNA1D-211ENST00000636570 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
CACNA1D-211ENST00000636570 RSF1Q96T23 1441 aaPredicted RBP11.02□□□□□ -0.64
CACNA1D-211ENST00000636570 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CACNA1D-211ENST00000636570 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
CACNA1D-211ENST00000636570 SMARCA2P51531 1590 aa10.96□□□□□ -0.66
CACNA1D-211ENST00000636570 TRIM52Q96A61 297 aa10.95□□□□□ -0.66
CACNA1D-211ENST00000636570 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
CACNA1D-211ENST00000636570 CECR2Q9BXF3 1484 aa10.91□□□□□ -0.66
CACNA1D-211ENST00000636570 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
CACNA1D-211ENST00000636570 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
CACNA1D-211ENST00000636570 CANXP27824 592 aaKnown RBP10.89□□□□□ -0.67
CACNA1D-211ENST00000636570 SENP3Q9H4L4 574 aaPredicted RBP10.88□□□□□ -0.67
CACNA1D-211ENST00000636570 FAM50AQ14320 339 aaKnown RBP10.87□□□□□ -0.67
CACNA1D-211ENST00000636570 RTL5Q5HYW3 569 aaPredicted RBP10.87□□□□□ -0.67
CACNA1D-211ENST00000636570 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
CACNA1D-211ENST00000636570 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
CACNA1D-211ENST00000636570 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
CACNA1D-211ENST00000636570 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
CACNA1D-211ENST00000636570 NEFMP07197 916 aa10.84□□□□□ -0.67
CACNA1D-211ENST00000636570 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
CACNA1D-211ENST00000636570 LOC105371045A0A1W2PR82 267 aa10.84□□□□□ -0.67
CACNA1D-211ENST00000636570 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
CACNA1D-211ENST00000636570 SMARCA4P51532 1647 aa10.82□□□□□ -0.68
CACNA1D-211ENST00000636570 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
CACNA1D-211ENST00000636570 NEUROD1Q13562 356 aa10.81□□□□□ -0.68
CACNA1D-211ENST00000636570 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-211ENST00000636570 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-211ENST00000636570 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
CACNA1D-211ENST00000636570 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-211ENST00000636570 WIZO95785 1651 aa10.74□□□□□ -0.69
CACNA1D-211ENST00000636570 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
CACNA1D-211ENST00000636570 EEA1Q15075 1411 aa10.73□□□□□ -0.69
CACNA1D-211ENST00000636570 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
CACNA1D-211ENST00000636570 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
CACNA1D-211ENST00000636570 ARXQ96QS3 562 aa10.71□□□□□ -0.7
CACNA1D-211ENST00000636570 CDK11BP21127 795 aaKnown RBP10.71□□□□□ -0.7
CACNA1D-211ENST00000636570 CDK11AQ9UQ88 783 aaPredicted RBP10.71□□□□□ -0.7
CACNA1D-211ENST00000636570 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
CACNA1D-211ENST00000636570 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
CACNA1D-211ENST00000636570 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-211ENST00000636570 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
CACNA1D-211ENST00000636570 CHMP7Q8WUX9 453 aaPredicted RBP10.66□□□□□ -0.7
CACNA1D-211ENST00000636570 KIF27Q86VH2 1401 aa10.66□□□□□ -0.7
CACNA1D-211ENST00000636570 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
CACNA1D-211ENST00000636570 CADPSQ9ULU8 1353 aa10.62□□□□□ -0.71
CACNA1D-211ENST00000636570 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
CACNA1D-211ENST00000636570 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
CACNA1D-211ENST00000636570 NPHP1O15259 732 aa10.6□□□□□ -0.71
CACNA1D-211ENST00000636570 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
CACNA1D-211ENST00000636570 HSP90AA1P07900 732 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms