RNA–Protein interactions for RNA: ENST00000549140.1

LINC02394-201, Transcript of long intergenic non-protein coding RNA 2394, humanhuman

TSL 4 BASIC

Gene LINC02394, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02394-201ENST00000549140 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
LINC02394-201ENST00000549140 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
LINC02394-201ENST00000549140 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
LINC02394-201ENST00000549140 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
LINC02394-201ENST00000549140 FOXD1Q16676 465 aa22.32■■□□□ 1.16
LINC02394-201ENST00000549140 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
LINC02394-201ENST00000549140 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
LINC02394-201ENST00000549140 ADRA2BP18089 450 aa21.34■■□□□ 1.01
LINC02394-201ENST00000549140 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
LINC02394-201ENST00000549140 MSH5O43196 834 aa20.68■□□□□ 0.9
LINC02394-201ENST00000549140 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
LINC02394-201ENST00000549140 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
LINC02394-201ENST00000549140 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
LINC02394-201ENST00000549140 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
LINC02394-201ENST00000549140 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
LINC02394-201ENST00000549140 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
LINC02394-201ENST00000549140 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
LINC02394-201ENST00000549140 KCNA4P22459 653 aa18.97■□□□□ 0.63
LINC02394-201ENST00000549140 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
LINC02394-201ENST00000549140 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
LINC02394-201ENST00000549140 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
LINC02394-201ENST00000549140 DCAF8L1A6NGE4 600 aa18.4■□□□□ 0.54
LINC02394-201ENST00000549140 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
LINC02394-201ENST00000549140 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
LINC02394-201ENST00000549140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC02394-201ENST00000549140 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
LINC02394-201ENST00000549140 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
LINC02394-201ENST00000549140 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
LINC02394-201ENST00000549140 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
LINC02394-201ENST00000549140 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
LINC02394-201ENST00000549140 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
LINC02394-201ENST00000549140 ZBTB22O15209 634 aa17.43■□□□□ 0.38
LINC02394-201ENST00000549140 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
LINC02394-201ENST00000549140 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
LINC02394-201ENST00000549140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
LINC02394-201ENST00000549140 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
LINC02394-201ENST00000549140 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
LINC02394-201ENST00000549140 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
LINC02394-201ENST00000549140 APLP2Q06481 763 aa17.18■□□□□ 0.34
LINC02394-201ENST00000549140 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
LINC02394-201ENST00000549140 CAPN15O75808 1086 aa17.06■□□□□ 0.32
LINC02394-201ENST00000549140 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
LINC02394-201ENST00000549140 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
LINC02394-201ENST00000549140 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
LINC02394-201ENST00000549140 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
LINC02394-201ENST00000549140 DSG3P32926 999 aa16.77■□□□□ 0.28
LINC02394-201ENST00000549140 ABCB7O75027 752 aa16.71■□□□□ 0.27
LINC02394-201ENST00000549140 POLA2Q14181 598 aa16.63■□□□□ 0.25
LINC02394-201ENST00000549140 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
LINC02394-201ENST00000549140 FBLN2P98095 1184 aa16.25■□□□□ 0.19
LINC02394-201ENST00000549140 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
LINC02394-201ENST00000549140 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
LINC02394-201ENST00000549140 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
LINC02394-201ENST00000549140 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
LINC02394-201ENST00000549140 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
LINC02394-201ENST00000549140 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
LINC02394-201ENST00000549140 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
LINC02394-201ENST00000549140 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
LINC02394-201ENST00000549140 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
LINC02394-201ENST00000549140 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
LINC02394-201ENST00000549140 FKBP8Q14318 412 aa15.62■□□□□ 0.09
LINC02394-201ENST00000549140 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
LINC02394-201ENST00000549140 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC02394-201ENST00000549140 POTEHQ6S545 545 aa15.55■□□□□ 0.08
LINC02394-201ENST00000549140 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
LINC02394-201ENST00000549140 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
LINC02394-201ENST00000549140 PROM2Q8N271 834 aa15.42■□□□□ 0.06
LINC02394-201ENST00000549140 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
LINC02394-201ENST00000549140 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
LINC02394-201ENST00000549140 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
LINC02394-201ENST00000549140 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
LINC02394-201ENST00000549140 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
LINC02394-201ENST00000549140 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
LINC02394-201ENST00000549140 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
LINC02394-201ENST00000549140 PRKAR2AP13861 404 aaKnown RBP15.07■□□□□ 0
LINC02394-201ENST00000549140 CHADLQ6NUI6 762 aa15.02■□□□□ -0
LINC02394-201ENST00000549140 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
LINC02394-201ENST00000549140 MIER1Q8N108 512 aa14.97□□□□□ -0.01
LINC02394-201ENST00000549140 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
LINC02394-201ENST00000549140 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
LINC02394-201ENST00000549140 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
LINC02394-201ENST00000549140 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
LINC02394-201ENST00000549140 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC02394-201ENST00000549140 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
LINC02394-201ENST00000549140 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
LINC02394-201ENST00000549140 HAX1O00165 279 aa14.75□□□□□ -0.05
LINC02394-201ENST00000549140 KLHL34Q8N239 644 aa14.72□□□□□ -0.05
LINC02394-201ENST00000549140 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
LINC02394-201ENST00000549140 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
LINC02394-201ENST00000549140 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
LINC02394-201ENST00000549140 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
LINC02394-201ENST00000549140 NUBP1P53384 320 aa14.55□□□□□ -0.08
LINC02394-201ENST00000549140 EVX2Q03828 476 aa14.55□□□□□ -0.08
LINC02394-201ENST00000549140 SPOCK2Q92563 424 aa14.55□□□□□ -0.08
LINC02394-201ENST00000549140 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
LINC02394-201ENST00000549140 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
LINC02394-201ENST00000549140 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
LINC02394-201ENST00000549140 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
LINC02394-201ENST00000549140 FAM212AQ96EL1 285 aa14.49□□□□□ -0.09
LINC02394-201ENST00000549140 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms