RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
TRAV16-201ENST00000390444 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
TRAV16-201ENST00000390444 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
TRAV16-201ENST00000390444 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
TRAV16-201ENST00000390444 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
TRAV16-201ENST00000390444 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
TRAV16-201ENST00000390444 FOXD1Q16676 465 aa11.2□□□□□ -0.62
TRAV16-201ENST00000390444 ADRA2BP18089 450 aa11.01□□□□□ -0.65
TRAV16-201ENST00000390444 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
TRAV16-201ENST00000390444 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
TRAV16-201ENST00000390444 CCDC180Q9P1Z9 1646 aa10.56□□□□□ -0.72
TRAV16-201ENST00000390444 KCNA4P22459 653 aa10.51□□□□□ -0.73
TRAV16-201ENST00000390444 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
TRAV16-201ENST00000390444 MSH5O43196 834 aa10.25□□□□□ -0.77
TRAV16-201ENST00000390444 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
TRAV16-201ENST00000390444 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
TRAV16-201ENST00000390444 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
TRAV16-201ENST00000390444 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
TRAV16-201ENST00000390444 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
TRAV16-201ENST00000390444 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
TRAV16-201ENST00000390444 ZCCHC6Q5VYS8 1495 aaKnown RBP10.04□□□□□ -0.8
TRAV16-201ENST00000390444 DCAF1Q9Y4B6 1507 aa9.94□□□□□ -0.82
TRAV16-201ENST00000390444 MAPK8IP2Q13387 824 aaPredicted RBP9.87□□□□□ -0.83
TRAV16-201ENST00000390444 CSRNP3Q8WYN3 585 aa9.86□□□□□ -0.83
TRAV16-201ENST00000390444 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
TRAV16-201ENST00000390444 ABCC9O60706 1549 aa9.81□□□□□ -0.84
TRAV16-201ENST00000390444 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
TRAV16-201ENST00000390444 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
TRAV16-201ENST00000390444 NACADO15069 1562 aa9.77□□□□□ -0.85
TRAV16-201ENST00000390444 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
TRAV16-201ENST00000390444 ZBTB22O15209 634 aa9.7□□□□□ -0.86
TRAV16-201ENST00000390444 RB1CC1Q8TDY2 1594 aa9.68□□□□□ -0.86
TRAV16-201ENST00000390444 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
TRAV16-201ENST00000390444 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
TRAV16-201ENST00000390444 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
TRAV16-201ENST00000390444 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
TRAV16-201ENST00000390444 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
TRAV16-201ENST00000390444 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
TRAV16-201ENST00000390444 SLC4A2P04920 1241 aa9.43□□□□□ -0.9
TRAV16-201ENST00000390444 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
TRAV16-201ENST00000390444 MYCNP04198 464 aaPredicted RBP9.34□□□□□ -0.91
TRAV16-201ENST00000390444 DCAF8L1A6NGE4 600 aa9.27□□□□□ -0.93
TRAV16-201ENST00000390444 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
TRAV16-201ENST00000390444 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
TRAV16-201ENST00000390444 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
TRAV16-201ENST00000390444 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.93
TRAV16-201ENST00000390444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.19□□□□□ -0.94
TRAV16-201ENST00000390444 RSF1Q96T23 1441 aaPredicted RBP9.19□□□□□ -0.94
TRAV16-201ENST00000390444 MROH2BQ7Z745 1585 aa9.19□□□□□ -0.94
TRAV16-201ENST00000390444 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAV16-201ENST00000390444 WIZO95785 1651 aa9.15□□□□□ -0.94
TRAV16-201ENST00000390444 PEG3Q9GZU2 1588 aa9.15□□□□□ -0.95
TRAV16-201ENST00000390444 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
TRAV16-201ENST00000390444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
TRAV16-201ENST00000390444 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
TRAV16-201ENST00000390444 SAMD1Q6SPF0 538 aaPredicted RBP9.1□□□□□ -0.95
TRAV16-201ENST00000390444 EIF4G1Q04637 1599 aaKnown RBP9.1□□□□□ -0.95
TRAV16-201ENST00000390444 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
TRAV16-201ENST00000390444 TOP2AP11388 1531 aaKnown RBP9.08□□□□□ -0.96
TRAV16-201ENST00000390444 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
TRAV16-201ENST00000390444 ATAD2BQ9ULI0 1458 aa9.02□□□□□ -0.97
TRAV16-201ENST00000390444 HMGXB3Q12766 1538 aa9.01□□□□□ -0.97
TRAV16-201ENST00000390444 ATF5Q9Y2D1 282 aaPredicted RBP9□□□□□ -0.97
TRAV16-201ENST00000390444 BAZ1BQ9UIG0 1483 aaKnown RBP8.97□□□□□ -0.97
TRAV16-201ENST00000390444 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
TRAV16-201ENST00000390444 NCAPD3P42695 1498 aa8.96□□□□□ -0.97
TRAV16-201ENST00000390444 APLP2Q06481 763 aa8.96□□□□□ -0.98
TRAV16-201ENST00000390444 FKBP8Q14318 412 aa8.92□□□□□ -0.98
TRAV16-201ENST00000390444 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
TRAV16-201ENST00000390444 PRDM2Q13029 1718 aa8.9□□□□□ -0.98
TRAV16-201ENST00000390444 ZNF219Q9P2Y4 722 aaPredicted RBP8.85□□□□□ -0.99
TRAV16-201ENST00000390444 RNF39Q9H2S5 420 aa8.8□□□□□ -1
TRAV16-201ENST00000390444 POTEDQ86YR6 584 aa8.75□□□□□ -1.01
TRAV16-201ENST00000390444 CFTRP13569 1480 aa8.75□□□□□ -1.01
TRAV16-201ENST00000390444 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
TRAV16-201ENST00000390444 SPINK5Q9NQ38 1064 aaPredicted RBP8.72□□□□□ -1.01
TRAV16-201ENST00000390444 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
TRAV16-201ENST00000390444 LAMC3Q9Y6N6 1575 aa8.72□□□□□ -1.01
TRAV16-201ENST00000390444 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
TRAV16-201ENST00000390444 BIVM-ERCC5R4GMW8 1640 aa8.71□□□□□ -1.02
TRAV16-201ENST00000390444 TRHP20396 242 aaPredicted RBP8.7□□□□□ -1.02
TRAV16-201ENST00000390444 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
TRAV16-201ENST00000390444 CAPN15O75808 1086 aa8.68□□□□□ -1.02
TRAV16-201ENST00000390444 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
TRAV16-201ENST00000390444 TOP2BQ02880 1626 aa8.67□□□□□ -1.02
TRAV16-201ENST00000390444 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
TRAV16-201ENST00000390444 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
TRAV16-201ENST00000390444 FBLN2P98095 1184 aa8.65□□□□□ -1.02
TRAV16-201ENST00000390444 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
TRAV16-201ENST00000390444 KIF21AQ7Z4S6 1674 aa8.63□□□□□ -1.03
TRAV16-201ENST00000390444 SPDYE4A6NLX3 237 aa8.62□□□□□ -1.03
TRAV16-201ENST00000390444 POLA2Q14181 598 aa8.62□□□□□ -1.03
TRAV16-201ENST00000390444 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
TRAV16-201ENST00000390444 CUX1P39880 1505 aa8.62□□□□□ -1.03
TRAV16-201ENST00000390444 NESP48681 1621 aa8.62□□□□□ -1.03
TRAV16-201ENST00000390444 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
TRAV16-201ENST00000390444 ZBTB12Q9Y330 459 aaPredicted RBP8.6□□□□□ -1.03
TRAV16-201ENST00000390444 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
TRAV16-201ENST00000390444 CEP164Q9UPV0 1460 aa8.58□□□□□ -1.04
TRAV16-201ENST00000390444 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms