RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
LINC02408-202ENST00000538573 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
LINC02408-202ENST00000538573 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
LINC02408-202ENST00000538573 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
LINC02408-202ENST00000538573 FOXD1Q16676 465 aa13.97□□□□□ -0.17
LINC02408-202ENST00000538573 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
LINC02408-202ENST00000538573 MSH5O43196 834 aa13.39□□□□□ -0.27
LINC02408-202ENST00000538573 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
LINC02408-202ENST00000538573 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
LINC02408-202ENST00000538573 ADRA2BP18089 450 aa12.86□□□□□ -0.35
LINC02408-202ENST00000538573 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
LINC02408-202ENST00000538573 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.5
LINC02408-202ENST00000538573 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
LINC02408-202ENST00000538573 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
LINC02408-202ENST00000538573 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
LINC02408-202ENST00000538573 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
LINC02408-202ENST00000538573 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
LINC02408-202ENST00000538573 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
LINC02408-202ENST00000538573 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
LINC02408-202ENST00000538573 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
LINC02408-202ENST00000538573 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
LINC02408-202ENST00000538573 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
LINC02408-202ENST00000538573 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
LINC02408-202ENST00000538573 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
LINC02408-202ENST00000538573 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
LINC02408-202ENST00000538573 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
LINC02408-202ENST00000538573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC02408-202ENST00000538573 POTEHQ6S545 545 aa10.74□□□□□ -0.69
LINC02408-202ENST00000538573 KCNA4P22459 653 aa10.71□□□□□ -0.69
LINC02408-202ENST00000538573 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
LINC02408-202ENST00000538573 CCDC180Q9P1Z9 1646 aa10.5□□□□□ -0.73
LINC02408-202ENST00000538573 CAPN15O75808 1086 aa10.47□□□□□ -0.73
LINC02408-202ENST00000538573 DSG3P32926 999 aa10.41□□□□□ -0.74
LINC02408-202ENST00000538573 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
LINC02408-202ENST00000538573 APLP2Q06481 763 aa10.38□□□□□ -0.75
LINC02408-202ENST00000538573 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
LINC02408-202ENST00000538573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
LINC02408-202ENST00000538573 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
LINC02408-202ENST00000538573 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
LINC02408-202ENST00000538573 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
LINC02408-202ENST00000538573 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
LINC02408-202ENST00000538573 ABCB7O75027 752 aa10.18□□□□□ -0.78
LINC02408-202ENST00000538573 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
LINC02408-202ENST00000538573 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
LINC02408-202ENST00000538573 ABCC9O60706 1549 aa10.09□□□□□ -0.79
LINC02408-202ENST00000538573 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
LINC02408-202ENST00000538573 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
LINC02408-202ENST00000538573 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
LINC02408-202ENST00000538573 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
LINC02408-202ENST00000538573 POLA2Q14181 598 aa9.99□□□□□ -0.81
LINC02408-202ENST00000538573 CHRDL2Q6WN34 429 aa9.97□□□□□ -0.81
LINC02408-202ENST00000538573 DCAF1Q9Y4B6 1507 aa9.87□□□□□ -0.83
LINC02408-202ENST00000538573 SP7Q8TDD2 431 aaPredicted RBP9.85□□□□□ -0.83
LINC02408-202ENST00000538573 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
LINC02408-202ENST00000538573 NACADO15069 1562 aa9.82□□□□□ -0.84
LINC02408-202ENST00000538573 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
LINC02408-202ENST00000538573 MYO15BQ96JP2 1530 aa9.81□□□□□ -0.84
LINC02408-202ENST00000538573 RB1CC1Q8TDY2 1594 aa9.79□□□□□ -0.84
LINC02408-202ENST00000538573 ZBTB22O15209 634 aa9.78□□□□□ -0.84
LINC02408-202ENST00000538573 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
LINC02408-202ENST00000538573 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
LINC02408-202ENST00000538573 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
LINC02408-202ENST00000538573 SCRIBQ14160 1630 aa9.65□□□□□ -0.86
LINC02408-202ENST00000538573 HAX1O00165 279 aa9.64□□□□□ -0.87
LINC02408-202ENST00000538573 OSCARQ8IYS5 282 aa9.63□□□□□ -0.87
LINC02408-202ENST00000538573 FBLN2P98095 1184 aa9.6□□□□□ -0.87
LINC02408-202ENST00000538573 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
LINC02408-202ENST00000538573 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
LINC02408-202ENST00000538573 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
LINC02408-202ENST00000538573 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC02408-202ENST00000538573 SPDYE2BA6NHP3 402 aa9.48□□□□□ -0.89
LINC02408-202ENST00000538573 SPDYE6P0CI01 402 aa9.48□□□□□ -0.89
LINC02408-202ENST00000538573 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
LINC02408-202ENST00000538573 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.89
LINC02408-202ENST00000538573 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC02408-202ENST00000538573 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
LINC02408-202ENST00000538573 ZNF692Q9BU19 519 aaPredicted RBP9.41□□□□□ -0.9
LINC02408-202ENST00000538573 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
LINC02408-202ENST00000538573 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
LINC02408-202ENST00000538573 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
LINC02408-202ENST00000538573 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
LINC02408-202ENST00000538573 SPDYE1Q8NFV5 336 aaPredicted RBP9.34□□□□□ -0.91
LINC02408-202ENST00000538573 CECR2Q9BXF3 1484 aa9.31□□□□□ -0.92
LINC02408-202ENST00000538573 EVX2Q03828 476 aa9.3□□□□□ -0.92
LINC02408-202ENST00000538573 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
LINC02408-202ENST00000538573 SUPT5HO00267 1087 aaKnown RBP9.27□□□□□ -0.93
LINC02408-202ENST00000538573 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
LINC02408-202ENST00000538573 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
LINC02408-202ENST00000538573 LHX8Q68G74 356 aa9.25□□□□□ -0.93
LINC02408-202ENST00000538573 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
LINC02408-202ENST00000538573 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
LINC02408-202ENST00000538573 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
LINC02408-202ENST00000538573 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
LINC02408-202ENST00000538573 EIF4G1Q04637 1599 aaKnown RBP9.2□□□□□ -0.94
LINC02408-202ENST00000538573 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
LINC02408-202ENST00000538573 GABBR2O75899 941 aa9.17□□□□□ -0.94
LINC02408-202ENST00000538573 WIZO95785 1651 aa9.16□□□□□ -0.94
LINC02408-202ENST00000538573 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
LINC02408-202ENST00000538573 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
LINC02408-202ENST00000538573 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms