RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
ATP2C1-212ENST00000507488 AEBP2Q6ZN18 517 aaPredicted RBP9.06□□□□□ -0.96
ATP2C1-212ENST00000507488 CHIC1Q5VXU3 224 aa8.72□□□□□ -1.01
ATP2C1-212ENST00000507488 SHROOM4Q9ULL8 1493 aa8.67□□□□□ -1.02
ATP2C1-212ENST00000507488 DCAF8L2P0C7V8 631 aa8.55□□□□□ -1.04
ATP2C1-212ENST00000507488 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
ATP2C1-212ENST00000507488 ZCCHC6Q5VYS8 1495 aaKnown RBP8.29□□□□□ -1.08
ATP2C1-212ENST00000507488 CCDC180Q9P1Z9 1646 aa8.26□□□□□ -1.09
ATP2C1-212ENST00000507488 ABCC9O60706 1549 aa8.17□□□□□ -1.1
ATP2C1-212ENST00000507488 SCRIBQ14160 1630 aa8.04□□□□□ -1.12
ATP2C1-212ENST00000507488 MYO15BQ96JP2 1530 aa7.99□□□□□ -1.13
ATP2C1-212ENST00000507488 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
ATP2C1-212ENST00000507488 CECR2Q9BXF3 1484 aa7.9□□□□□ -1.14
ATP2C1-212ENST00000507488 PABPN1Q86U42 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATP2C1-212ENST00000507488 DCAF1Q9Y4B6 1507 aa7.89□□□□□ -1.15
ATP2C1-212ENST00000507488 LOC105371045A0A1W2PR82 267 aa7.88□□□□□ -1.15
ATP2C1-212ENST00000507488 RSF1Q96T23 1441 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-212ENST00000507488 SENP3Q9H4L4 574 aaPredicted RBP7.81□□□□□ -1.16
ATP2C1-212ENST00000507488 FAM9AQ8IZU1 332 aaPredicted RBP7.8□□□□□ -1.16
ATP2C1-212ENST00000507488 MROH2BQ7Z745 1585 aa7.79□□□□□ -1.16
ATP2C1-212ENST00000507488 RB1CC1Q8TDY2 1594 aa7.78□□□□□ -1.16
ATP2C1-212ENST00000507488 WIZO95785 1651 aa7.74□□□□□ -1.17
ATP2C1-212ENST00000507488 NACADO15069 1562 aa7.72□□□□□ -1.17
ATP2C1-212ENST00000507488 UNC13AQ9UPW8 1703 aa7.69□□□□□ -1.18
ATP2C1-212ENST00000507488 PHF23Q9BUL5 403 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-212ENST00000507488 PPARGC1BQ86YN6 1023 aaKnown RBP7.65□□□□□ -1.18
ATP2C1-212ENST00000507488 TRIM41Q8WV44 630 aa7.63□□□□□ -1.19
ATP2C1-212ENST00000507488 BICRAQ9NZM4 1560 aa7.63□□□□□ -1.19
ATP2C1-212ENST00000507488 PCGF6Q9BYE7 350 aa7.62□□□□□ -1.19
ATP2C1-212ENST00000507488 ABCC8Q09428 1581 aa7.58□□□□□ -1.2
ATP2C1-212ENST00000507488 TTBK1Q5TCY1 1321 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-212ENST00000507488 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
ATP2C1-212ENST00000507488 SMARCA4P51532 1647 aa7.54□□□□□ -1.2
ATP2C1-212ENST00000507488 DNAJC5BQ9UF47 199 aa7.51□□□□□ -1.21
ATP2C1-212ENST00000507488 RUSC2Q8N2Y8 1516 aa7.51□□□□□ -1.21
ATP2C1-212ENST00000507488 BAZ1AQ9NRL2 1556 aaPredicted RBP7.51□□□□□ -1.21
ATP2C1-212ENST00000507488 SMARCA2P51531 1590 aa7.48□□□□□ -1.21
ATP2C1-212ENST00000507488 SOGA1O94964 1423 aa7.48□□□□□ -1.21
ATP2C1-212ENST00000507488 RANGAP1P46060 587 aaPredicted RBP7.48□□□□□ -1.21
ATP2C1-212ENST00000507488 EIF4G1Q04637 1599 aaKnown RBP7.46□□□□□ -1.21
ATP2C1-212ENST00000507488 TOP2AP11388 1531 aaKnown RBP7.45□□□□□ -1.22
ATP2C1-212ENST00000507488 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
ATP2C1-212ENST00000507488 HRCP23327 699 aa7.4□□□□□ -1.22
ATP2C1-212ENST00000507488 BAZ1BQ9UIG0 1483 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-212ENST00000507488 SYNJ1O43426 1573 aa7.35□□□□□ -1.23
ATP2C1-212ENST00000507488 UBTFP17480 764 aaKnown RBP7.32□□□□□ -1.24
ATP2C1-212ENST00000507488 WRNQ14191 1432 aaPredicted RBP eCLIP7.31□□□□□ -1.24
ATP2C1-212ENST00000507488 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
ATP2C1-212ENST00000507488 TRIM26Q12899 539 aaPredicted RBP7.29□□□□□ -1.24
ATP2C1-212ENST00000507488 CSRNP3Q8WYN3 585 aa7.29□□□□□ -1.24
ATP2C1-212ENST00000507488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.28□□□□□ -1.24
ATP2C1-212ENST00000507488 NESP48681 1621 aa7.28□□□□□ -1.24
ATP2C1-212ENST00000507488 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
ATP2C1-212ENST00000507488 RAPGEF2Q9Y4G8 1499 aa7.25□□□□□ -1.25
ATP2C1-212ENST00000507488 CC2D2AQ9P2K1 1620 aa7.24□□□□□ -1.25
ATP2C1-212ENST00000507488 CUX1P39880 1505 aa7.23□□□□□ -1.25
ATP2C1-212ENST00000507488 NCAPD3P42695 1498 aa7.22□□□□□ -1.25
ATP2C1-212ENST00000507488 FOXD1Q16676 465 aa7.21□□□□□ -1.26
ATP2C1-212ENST00000507488 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
ATP2C1-212ENST00000507488 HNRNPUL2Q1KMD3 747 aaKnown RBP7.17□□□□□ -1.26
ATP2C1-212ENST00000507488 RAD54L2Q9Y4B4 1467 aa7.17□□□□□ -1.26
ATP2C1-212ENST00000507488 CFTRP13569 1480 aa7.16□□□□□ -1.26
ATP2C1-212ENST00000507488 KANK4Q5T7N3 995 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-212ENST00000507488 TNIKQ9UKE5 1360 aa7.15□□□□□ -1.26
ATP2C1-212ENST00000507488 HMGXB3Q12766 1538 aa7.14□□□□□ -1.27
ATP2C1-212ENST00000507488 TOP2BQ02880 1626 aa7.14□□□□□ -1.27
ATP2C1-212ENST00000507488 CADPSQ9ULU8 1353 aa7.13□□□□□ -1.27
ATP2C1-212ENST00000507488 GOLGA3Q08378 1498 aa7.13□□□□□ -1.27
ATP2C1-212ENST00000507488 ZEB1P37275 1124 aaPredicted RBP7.12□□□□□ -1.27
ATP2C1-212ENST00000507488 CLIP1P30622 1438 aa7.12□□□□□ -1.27
ATP2C1-212ENST00000507488 CUX2O14529 1486 aa7.11□□□□□ -1.27
ATP2C1-212ENST00000507488 FGD5Q6ZNL6 1462 aa7.1□□□□□ -1.27
ATP2C1-212ENST00000507488 TDRD9Q8NDG6 1382 aaKnown RBP7.1□□□□□ -1.27
ATP2C1-212ENST00000507488 IGF1RP08069 1367 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 ITGAEP38570 1179 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 ARAP1Q96P48 1450 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 FANCD2Q9BXW9 1451 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 ARID3CA6NKF2 412 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 KIF21BO75037 1637 aa7.09□□□□□ -1.27
ATP2C1-212ENST00000507488 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.28
ATP2C1-212ENST00000507488 CEP164Q9UPV0 1460 aa7.08□□□□□ -1.28
ATP2C1-212ENST00000507488 BIVM-ERCC5R4GMW8 1640 aa7.08□□□□□ -1.28
ATP2C1-212ENST00000507488 ATP1B4Q9UN42 357 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-212ENST00000507488 PRXQ9BXM0 1461 aa7.07□□□□□ -1.28
ATP2C1-212ENST00000507488 URB2Q14146 1524 aaKnown RBP7.05□□□□□ -1.28
ATP2C1-212ENST00000507488 POLA1P09884 1462 aaPredicted RBP7.04□□□□□ -1.28
ATP2C1-212ENST00000507488 EEA1Q15075 1411 aa7.04□□□□□ -1.28
ATP2C1-212ENST00000507488 KIF27Q86VH2 1401 aa7.04□□□□□ -1.28
ATP2C1-212ENST00000507488 ARHGAP35Q9NRY4 1499 aa7.03□□□□□ -1.28
ATP2C1-212ENST00000507488 TOPBP1Q92547 1522 aa7.03□□□□□ -1.28
ATP2C1-212ENST00000507488 CARMIL1Q5VZK9 1371 aa7.02□□□□□ -1.29
ATP2C1-212ENST00000507488 VPS8Q8N3P4 1428 aa7.02□□□□□ -1.29
ATP2C1-212ENST00000507488 AQRO60306 1485 aaKnown RBP eCLIP7.01□□□□□ -1.292e-7■■■■■ 33.1
ATP2C1-212ENST00000507488 KIF21AQ7Z4S6 1674 aa7□□□□□ -1.29
ATP2C1-212ENST00000507488 FHOD3Q2V2M9 1422 aa7□□□□□ -1.29
ATP2C1-212ENST00000507488 PLPPR3Q6T4P5 718 aa6.99□□□□□ -1.29
ATP2C1-212ENST00000507488 ZNF608Q9ULD9 1512 aaPredicted RBP6.98□□□□□ -1.29
ATP2C1-212ENST00000507488 APLP2Q06481 763 aa6.96□□□□□ -1.3
ATP2C1-212ENST00000507488 PRDM2Q13029 1718 aa6.94□□□□□ -1.3
ATP2C1-212ENST00000507488 PHLDB1Q86UU1 1377 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms