RNA–Protein interactions for RNA: ENST00000522820.5

NECAB1-205, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 2 BASIC

Gene NECAB1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-205ENST00000522820 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
NECAB1-205ENST00000522820 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
NECAB1-205ENST00000522820 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
NECAB1-205ENST00000522820 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
NECAB1-205ENST00000522820 FOXD1Q16676 465 aa21.53■■□□□ 1.04
NECAB1-205ENST00000522820 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
NECAB1-205ENST00000522820 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
NECAB1-205ENST00000522820 MSH5O43196 834 aa20.13■□□□□ 0.81
NECAB1-205ENST00000522820 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
NECAB1-205ENST00000522820 ADRA2BP18089 450 aa20.07■□□□□ 0.8
NECAB1-205ENST00000522820 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
NECAB1-205ENST00000522820 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
NECAB1-205ENST00000522820 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
NECAB1-205ENST00000522820 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
NECAB1-205ENST00000522820 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
NECAB1-205ENST00000522820 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
NECAB1-205ENST00000522820 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
NECAB1-205ENST00000522820 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
NECAB1-205ENST00000522820 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
NECAB1-205ENST00000522820 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
NECAB1-205ENST00000522820 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
NECAB1-205ENST00000522820 KCNA4P22459 653 aa17.27■□□□□ 0.36
NECAB1-205ENST00000522820 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
NECAB1-205ENST00000522820 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
NECAB1-205ENST00000522820 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
NECAB1-205ENST00000522820 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
NECAB1-205ENST00000522820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
NECAB1-205ENST00000522820 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
NECAB1-205ENST00000522820 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
NECAB1-205ENST00000522820 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
NECAB1-205ENST00000522820 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
NECAB1-205ENST00000522820 CAPN15O75808 1086 aa16.18■□□□□ 0.18
NECAB1-205ENST00000522820 DSG3P32926 999 aa16.1■□□□□ 0.17
NECAB1-205ENST00000522820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
NECAB1-205ENST00000522820 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
NECAB1-205ENST00000522820 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
NECAB1-205ENST00000522820 APLP2Q06481 763 aa16.02■□□□□ 0.16
NECAB1-205ENST00000522820 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
NECAB1-205ENST00000522820 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
NECAB1-205ENST00000522820 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
NECAB1-205ENST00000522820 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
NECAB1-205ENST00000522820 ZBTB22O15209 634 aa15.83■□□□□ 0.12
NECAB1-205ENST00000522820 ABCB7O75027 752 aa15.82■□□□□ 0.12
NECAB1-205ENST00000522820 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
NECAB1-205ENST00000522820 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
NECAB1-205ENST00000522820 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
NECAB1-205ENST00000522820 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
NECAB1-205ENST00000522820 POLA2Q14181 598 aa15.49■□□□□ 0.07
NECAB1-205ENST00000522820 POTEHQ6S545 545 aa15.42■□□□□ 0.06
NECAB1-205ENST00000522820 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
NECAB1-205ENST00000522820 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
NECAB1-205ENST00000522820 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
NECAB1-205ENST00000522820 OSCARQ8IYS5 282 aa15.03■□□□□ -0
NECAB1-205ENST00000522820 FBLN2P98095 1184 aa15.02■□□□□ -0
NECAB1-205ENST00000522820 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
NECAB1-205ENST00000522820 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
NECAB1-205ENST00000522820 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
NECAB1-205ENST00000522820 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
NECAB1-205ENST00000522820 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
NECAB1-205ENST00000522820 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
NECAB1-205ENST00000522820 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
NECAB1-205ENST00000522820 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
NECAB1-205ENST00000522820 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
NECAB1-205ENST00000522820 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
NECAB1-205ENST00000522820 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
NECAB1-205ENST00000522820 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
NECAB1-205ENST00000522820 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
NECAB1-205ENST00000522820 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
NECAB1-205ENST00000522820 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
NECAB1-205ENST00000522820 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
NECAB1-205ENST00000522820 HAX1O00165 279 aa14.39□□□□□ -0.11
NECAB1-205ENST00000522820 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
NECAB1-205ENST00000522820 EVX2Q03828 476 aa14.24□□□□□ -0.13
NECAB1-205ENST00000522820 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
NECAB1-205ENST00000522820 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
NECAB1-205ENST00000522820 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
NECAB1-205ENST00000522820 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
NECAB1-205ENST00000522820 FKBP8Q14318 412 aa14.09□□□□□ -0.15
NECAB1-205ENST00000522820 PROM2Q8N271 834 aa14.03□□□□□ -0.16
NECAB1-205ENST00000522820 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
NECAB1-205ENST00000522820 GABBR2O75899 941 aa13.9□□□□□ -0.18
NECAB1-205ENST00000522820 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
NECAB1-205ENST00000522820 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
NECAB1-205ENST00000522820 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
NECAB1-205ENST00000522820 MIER1Q8N108 512 aa13.76□□□□□ -0.21
NECAB1-205ENST00000522820 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
NECAB1-205ENST00000522820 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
NECAB1-205ENST00000522820 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
NECAB1-205ENST00000522820 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
NECAB1-205ENST00000522820 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
NECAB1-205ENST00000522820 CLCN6P51797 869 aa13.64□□□□□ -0.23
NECAB1-205ENST00000522820 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
NECAB1-205ENST00000522820 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
NECAB1-205ENST00000522820 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
NECAB1-205ENST00000522820 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
NECAB1-205ENST00000522820 LHX8Q68G74 356 aa13.54□□□□□ -0.24
NECAB1-205ENST00000522820 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
NECAB1-205ENST00000522820 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
NECAB1-205ENST00000522820 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
NECAB1-205ENST00000522820 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms