RNA–Protein interactions for RNA: ENST00000469404.1

NCK1-204, Transcript of NCK adaptor protein 1, humanhuman

TSL 2 BASIC

Gene NCK1, Length 2,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-204ENST00000469404 AEBP2Q6ZN18 517 aaPredicted RBP13.37□□□□□ -0.27
NCK1-204ENST00000469404 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
NCK1-204ENST00000469404 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
NCK1-204ENST00000469404 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
NCK1-204ENST00000469404 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
NCK1-204ENST00000469404 FOXD1Q16676 465 aa10.99□□□□□ -0.65
NCK1-204ENST00000469404 MSH5O43196 834 aa10.96□□□□□ -0.65
NCK1-204ENST00000469404 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
NCK1-204ENST00000469404 PIAS4Q8N2W9 510 aaPredicted RBP10.02□□□□□ -0.81
NCK1-204ENST00000469404 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
NCK1-204ENST00000469404 POTEHQ6S545 545 aa9.53□□□□□ -0.88
NCK1-204ENST00000469404 PPP6R1Q9UPN7 881 aa9.27□□□□□ -0.92
NCK1-204ENST00000469404 ADRA2BP18089 450 aa9.21□□□□□ -0.93
NCK1-204ENST00000469404 DMRT2Q9Y5R5 561 aa9.19□□□□□ -0.94
NCK1-204ENST00000469404 RNF39Q9H2S5 420 aa9.12□□□□□ -0.95
NCK1-204ENST00000469404 C1QBPQ07021 282 aaKnown RBP9.03□□□□□ -0.96
NCK1-204ENST00000469404 PLPPR3Q6T4P5 718 aa8.95□□□□□ -0.98
NCK1-204ENST00000469404 CCDC180Q9P1Z9 1646 aa8.82□□□□□ -1
NCK1-204ENST00000469404 DCAF8L2P0C7V8 631 aa8.82□□□□□ -1
NCK1-204ENST00000469404 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
NCK1-204ENST00000469404 ABCC9O60706 1549 aa8.76□□□□□ -1.01
NCK1-204ENST00000469404 MAPK8IP2Q13387 824 aaPredicted RBP8.75□□□□□ -1.01
NCK1-204ENST00000469404 DCAF8L1A6NGE4 600 aa8.69□□□□□ -1.02
NCK1-204ENST00000469404 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
NCK1-204ENST00000469404 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
NCK1-204ENST00000469404 ZCCHC6Q5VYS8 1495 aaKnown RBP8.48□□□□□ -1.05
NCK1-204ENST00000469404 SP7Q8TDD2 431 aaPredicted RBP8.44□□□□□ -1.06
NCK1-204ENST00000469404 HOXD11P31277 338 aaPredicted RBP8.42□□□□□ -1.06
NCK1-204ENST00000469404 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
NCK1-204ENST00000469404 PABPN1Q86U42 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
NCK1-204ENST00000469404 RB1CC1Q8TDY2 1594 aa8.31□□□□□ -1.08
NCK1-204ENST00000469404 NACADO15069 1562 aa8.29□□□□□ -1.08
NCK1-204ENST00000469404 DCAF1Q9Y4B6 1507 aa8.25□□□□□ -1.09
NCK1-204ENST00000469404 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
NCK1-204ENST00000469404 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
NCK1-204ENST00000469404 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
NCK1-204ENST00000469404 DSG3P32926 999 aa8.12□□□□□ -1.11
NCK1-204ENST00000469404 SUPT5HO00267 1087 aaKnown RBP8.11□□□□□ -1.11
NCK1-204ENST00000469404 CHRDL2Q6WN34 429 aa8.07□□□□□ -1.12
NCK1-204ENST00000469404 RNF216Q9NWF9 866 aaPredicted RBP8.07□□□□□ -1.12
NCK1-204ENST00000469404 BICRAQ9NZM4 1560 aa8.06□□□□□ -1.12
NCK1-204ENST00000469404 CECR2Q9BXF3 1484 aa8.01□□□□□ -1.13
NCK1-204ENST00000469404 RBM42Q9BTD8 480 aaKnown RBP7.97□□□□□ -1.13
NCK1-204ENST00000469404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.95□□□□□ -1.14
NCK1-204ENST00000469404 MROH2BQ7Z745 1585 aa7.91□□□□□ -1.14
NCK1-204ENST00000469404 LHX8Q68G74 356 aa7.89□□□□□ -1.15
NCK1-204ENST00000469404 CAPN15O75808 1086 aa7.88□□□□□ -1.15
NCK1-204ENST00000469404 RSF1Q96T23 1441 aaPredicted RBP7.87□□□□□ -1.15
NCK1-204ENST00000469404 EIF4G1Q04637 1599 aaKnown RBP7.87□□□□□ -1.15
NCK1-204ENST00000469404 WIZO95785 1651 aa7.86□□□□□ -1.15
NCK1-204ENST00000469404 SMARCA4P51532 1647 aa7.85□□□□□ -1.15
NCK1-204ENST00000469404 BAZ1AQ9NRL2 1556 aaPredicted RBP7.85□□□□□ -1.15
NCK1-204ENST00000469404 CNKSR2Q8WXI2 1034 aa7.84□□□□□ -1.15
NCK1-204ENST00000469404 CC2D2AQ9P2K1 1620 aa7.82□□□□□ -1.16
NCK1-204ENST00000469404 ATAD2BQ9ULI0 1458 aa7.77□□□□□ -1.17
NCK1-204ENST00000469404 BAZ1BQ9UIG0 1483 aaKnown RBP7.77□□□□□ -1.17
NCK1-204ENST00000469404 HAX1O00165 279 aa7.77□□□□□ -1.17
NCK1-204ENST00000469404 SMARCA2P51531 1590 aa7.73□□□□□ -1.17
NCK1-204ENST00000469404 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
NCK1-204ENST00000469404 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
NCK1-204ENST00000469404 TOP2AP11388 1531 aaKnown RBP7.68□□□□□ -1.18
NCK1-204ENST00000469404 CCDC88BA6NC98 1476 aa7.67□□□□□ -1.18
NCK1-204ENST00000469404 NCAPD3P42695 1498 aa7.67□□□□□ -1.18
NCK1-204ENST00000469404 PEG3Q9GZU2 1588 aa7.65□□□□□ -1.19
NCK1-204ENST00000469404 APLP2Q06481 763 aa7.63□□□□□ -1.19
NCK1-204ENST00000469404 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
NCK1-204ENST00000469404 PPP4R3CPQ6ZMV5 832 aa7.62□□□□□ -1.19
NCK1-204ENST00000469404 NESP48681 1621 aa7.62□□□□□ -1.19
NCK1-204ENST00000469404 PIP4P2Q8N4L2 257 aa7.61□□□□□ -1.19
NCK1-204ENST00000469404 U3KPZ7 1027 aaPredicted RBP7.6□□□□□ -1.19
NCK1-204ENST00000469404 EHMT2Q96KQ7 1210 aa7.59□□□□□ -1.19
NCK1-204ENST00000469404 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
NCK1-204ENST00000469404 FAM9AQ8IZU1 332 aaPredicted RBP7.55□□□□□ -1.2
NCK1-204ENST00000469404 ABCC8Q09428 1581 aa7.55□□□□□ -1.2
NCK1-204ENST00000469404 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
NCK1-204ENST00000469404 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
NCK1-204ENST00000469404 ERCC6Q03468 1493 aa7.52□□□□□ -1.21
NCK1-204ENST00000469404 AKT1S1Q96B36 256 aa7.5□□□□□ -1.21
NCK1-204ENST00000469404 CFTRP13569 1480 aa7.49□□□□□ -1.21
NCK1-204ENST00000469404 ABCB7O75027 752 aa7.49□□□□□ -1.21
NCK1-204ENST00000469404 FANCD2Q9BXW9 1451 aa7.49□□□□□ -1.21
NCK1-204ENST00000469404 FXR2P51116 673 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCK1-204ENST00000469404 KIF21AQ7Z4S6 1674 aa7.46□□□□□ -1.22
NCK1-204ENST00000469404 PDS5BQ9NTI5 1447 aa7.45□□□□□ -1.22
NCK1-204ENST00000469404 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
NCK1-204ENST00000469404 WRNQ14191 1432 aaPredicted RBP eCLIP7.44□□□□□ -1.22
NCK1-204ENST00000469404 LAMC3Q9Y6N6 1575 aa7.44□□□□□ -1.22
NCK1-204ENST00000469404 POTEMA6NI47 508 aa7.44□□□□□ -1.22
NCK1-204ENST00000469404 EVX2Q03828 476 aa7.43□□□□□ -1.22
NCK1-204ENST00000469404 TRHP20396 242 aaPredicted RBP7.42□□□□□ -1.22
NCK1-204ENST00000469404 SYNJ1O43426 1573 aa7.41□□□□□ -1.22
NCK1-204ENST00000469404 RANGAP1P46060 587 aaPredicted RBP7.4□□□□□ -1.23
NCK1-204ENST00000469404 CUX1P39880 1505 aa7.39□□□□□ -1.23
NCK1-204ENST00000469404 URB2Q14146 1524 aaKnown RBP7.38□□□□□ -1.23
NCK1-204ENST00000469404 RAD54L2Q9Y4B4 1467 aa7.38□□□□□ -1.23
NCK1-204ENST00000469404 GABBR2O75899 941 aa7.38□□□□□ -1.23
NCK1-204ENST00000469404 POTEGQ6S5H5 508 aa7.38□□□□□ -1.23
NCK1-204ENST00000469404 PRDM2Q13029 1718 aa7.38□□□□□ -1.23
NCK1-204ENST00000469404 SOGA1O94964 1423 aa7.37□□□□□ -1.23
NCK1-204ENST00000469404 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms