Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 AC083880.1-201ENST00000608266 535 ntBASIC19.13■□□□□ 0.65
NPAS2Q99743 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NPAS2Q99743 MYC-209ENST00000641252 345 ntBASIC19.13■□□□□ 0.65
NPAS2Q99743 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.13■□□□□ 0.65
NPAS2Q99743 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.13■□□□□ 0.65
NPAS2Q99743 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.13■□□□□ 0.65
NPAS2Q99743 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPAS2Q99743 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NPAS2Q99743 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS2Q99743 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.12■□□□□ 0.65
NPAS2Q99743 TSPY20P-201ENST00000450910 630 ntBASIC19.12■□□□□ 0.65
NPAS2Q99743 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.12■□□□□ 0.65
NPAS2Q99743 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.12■□□□□ 0.65
NPAS2Q99743 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPAS2Q99743 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NPAS2Q99743 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.11■□□□□ 0.65
NPAS2Q99743 KRT17P1-201ENST00000399211 1546 ntBASIC19.11■□□□□ 0.65
NPAS2Q99743 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NPAS2Q99743 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
NPAS2Q99743 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.11■□□□□ 0.65
NPAS2Q99743 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NPAS2Q99743 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS2Q99743 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 CDV3P1-201ENST00000471403 739 ntBASIC19.11■□□□□ 0.65
NPAS2Q99743 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.11■□□□□ 0.65
NPAS2Q99743 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.11■□□□□ 0.65
NPAS2Q99743 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.11■□□□□ 0.65
NPAS2Q99743 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPAS2Q99743 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPAS2Q99743 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS2Q99743 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS2Q99743 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NPAS2Q99743 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS2Q99743 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.1■□□□□ 0.65
NPAS2Q99743 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS2Q99743 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NPAS2Q99743 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS2Q99743 AC091874.3-201ENST00000512672 1195 ntBASIC19.1■□□□□ 0.65
NPAS2Q99743 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS2Q99743 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NPAS2Q99743 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NPAS2Q99743 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.09■□□□□ 0.65
NPAS2Q99743 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS2Q99743 DUSP5P2-201ENST00000426873 1033 ntBASIC19.09■□□□□ 0.65
NPAS2Q99743 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.09■□□□□ 0.65
NPAS2Q99743 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.09■□□□□ 0.65
NPAS2Q99743 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.09■□□□□ 0.65
NPAS2Q99743 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS2Q99743 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPAS2Q99743 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS2Q99743 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms