Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RDH11Q8TC12 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RDH11Q8TC12 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RDH11Q8TC12 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RDH11Q8TC12 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RDH11Q8TC12 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.67
RDH11Q8TC12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 AL512625.2-201ENST00000417533 625 ntBASIC19.26■□□□□ 0.67
RDH11Q8TC12 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH11Q8TC12 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RDH11Q8TC12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 AC007322.1-201ENST00000426983 750 ntBASIC19.25■□□□□ 0.67
RDH11Q8TC12 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 BID-214ENST00000617586 542 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH11Q8TC12 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH11Q8TC12 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 KRT17P1-201ENST00000399211 1546 ntBASIC19.24■□□□□ 0.67
RDH11Q8TC12 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RDH11Q8TC12 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH11Q8TC12 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.23■□□□□ 0.67
RDH11Q8TC12 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 AC141586.3-201ENST00000562166 1838 ntBASIC19.23■□□□□ 0.67
RDH11Q8TC12 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH11Q8TC12 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms